RPSBLAST alignment for GI: 254780445 and conserved domain: TIGR00435
>gnl|CDD|161877 TIGR00435, cysS, cysteinyl-tRNA synthetase. This model finds the cysteinyl-tRNA synthetase from most but not from all species. The enzyme from one archaeal species, Archaeoglobus fulgidus, is found but the equivalent enzymes from some other Archaea, including Methanococcus jannaschii, are not found, although biochemical evidence suggests that tRNA(Cys) in these species are charged directly with Cys rather than through a misacylation and correction pathway as for tRNA(Gln). Length = 465
Score = 40.1 bits (94), Expect = 0.003
Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 28/199 (14%)
Query: 583 LAWPADVYLEGSDQHRGWFQHSLLESCATRGST--PFTSLITHGFSVDENGEKMSKSKGN 640
L D++ G D F H E + + H + + EKMSKS GN
Sbjct: 216 LGDQIDIHGGGVDLI---FPHHENEIAQSEAAFGKQLAKYWMHNGFLMIDNEKMSKSLGN 272
Query: 641 VVFPEEIISESGADVLRYWAVNSDYHDDQRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHD 700
+++ ++LRY+ ++ Y + +++ + +L +R + LA+
Sbjct: 273 FFTVRDVLKNYDPEILRYFLLSVHYRSPLDFSEELLEAAKNALERLYKALRVLDTTLAYS 332
Query: 701 TGNEPSLADMPALEQLMLHRLTELDQVVREAYDAFNFKEVVRQLTNFSNAELSSFYFDIR 760
SL P ++ + EA D + N +NA L+ + +
Sbjct: 333 GNQ--SLNKFPDEKE--------FEARFVEAMD-DDL--------NTANA-LAVLFELAK 372
Query: 761 KDSLYCDSPSSLKRLSSIA 779
+L S + +
Sbjct: 373 SINLT---FVSKADAALLI 388