BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780446|ref|YP_003064859.1| hypothetical protein
CLIBASIA_01655 [Candidatus Liberibacter asiaticus str. psy62]
(171 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780446|ref|YP_003064859.1| hypothetical protein CLIBASIA_01655 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040123|gb|ACT56919.1| hypothetical protein CLIBASIA_01655 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 171
Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats.
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MISAESDTSQNFTIVLSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGYL 60
MISAESDTSQNFTIVLSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGYL
Sbjct: 1 MISAESDTSQNFTIVLSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGYL 60
Query: 61 PSDRLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIG 120
PSDRLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIG
Sbjct: 61 PSDRLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIG 120
Query: 121 KNSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQNNWIRCY 171
KNSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQNNWIRCY
Sbjct: 121 KNSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQNNWIRCY 171
>gi|187477982|ref|YP_786006.1| phage protein [Bordetella avium 197N]
gi|115422568|emb|CAJ49093.1| Putative phage protein [Bordetella avium 197N]
Length = 174
Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats.
Identities = 80/162 (49%), Positives = 103/162 (63%)
Query: 4 AESDTSQNFTIVLSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGYLPSD 63
+ S S+ I+ Q I L F H LLV D N+ ++E+DGL +K G KPIGYLPSD
Sbjct: 2 SHSIPSKTGHIIKCQFPIALAFGHNLLVQTDGNRGLLSEVDGLATSKSGTIKPIGYLPSD 61
Query: 64 RLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIGKNS 123
+LKV+EF P LY+ Q QV++ S V RW A +N N+PYP LG+G+NS
Sbjct: 62 QLKVYEFSRPYLYRSIQRQVIIFSGESIEVERRWLALRDGLHAINTLNLPYPILGLGRNS 121
Query: 124 NSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQN 165
NSVASTLIRCM L EL IP+++ AP QG++LL IN+IQ
Sbjct: 122 NSVASTLIRCMALDELPIPHSRFAPGQGLMLLPISTINDIQR 163
>gi|28198734|ref|NP_779048.1| hypothetical protein PD0829 [Xylella fastidiosa Temecula1]
gi|182681427|ref|YP_001829587.1| hypothetical protein XfasM23_0878 [Xylella fastidiosa M23]
gi|28056825|gb|AAO28697.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182631537|gb|ACB92313.1| conserved hypothetical protein [Xylella fastidiosa M23]
gi|307579877|gb|ADN63846.1| hypothetical protein XFLM_09825 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 168
Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats.
Identities = 80/167 (47%), Positives = 120/167 (71%), Gaps = 1/167 (0%)
Query: 2 ISAESDTSQNFTIVLSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGYLP 61
+ +E+D + +++I+LSQL I F H LLV+ D++ + ++E+DGL +K+G+ KP+GYLP
Sbjct: 1 MKSENDNA-DYSIILSQLRIARLFGHNLLVLKDNSGKLISEIDGLATSKNGETKPVGYLP 59
Query: 62 SDRLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIGK 121
SDRLK FEFK LYK Q Q+ L ++++E +++WN A++ ++N KN+PYP G+GK
Sbjct: 60 SDRLKAFEFKSALLYKSSQAQIALINANKEICLNKWNVALNAITLINTKNLPYPIFGLGK 119
Query: 122 NSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQNNWI 168
NSNSV STLIRCM L E IP+ IAP+ G ILL + +I ++Q+ I
Sbjct: 120 NSNSVTSTLIRCMDLHEPQIPSGGIAPFSGEILLSEAEIEKLQSALI 166
>gi|298369422|ref|ZP_06980740.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
gi|298283425|gb|EFI24912.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
Length = 251
Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats.
Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 5/165 (3%)
Query: 6 SDTSQNFTIVLSQLT-IGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGYLPSDR 64
+DT N+ IV SQL IG H +VV D N + EL+GL ++DG+ KPIGYLPSDR
Sbjct: 2 ADTG-NYKIVKSQLPLIGGTAGHNFIVVLDPNNRPIHELNGLATSQDGEIKPIGYLPSDR 60
Query: 65 LKVFEFKYPC--LYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIGKN 122
L+V+ + Y Q Q ++ S E VM ++N + +N +N YP LG+G+N
Sbjct: 61 LRVYNEQEAKMRFYHPSQNQEIVFEGSYEEVMHKFNLGYEIGQEINRRNPSYPILGLGQN 120
Query: 123 SNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQNNW 167
SNSVASTL+R M LK+ + A + P + +L+ + ++ I+ NW
Sbjct: 121 SNSVASTLLRGMNLKDPDLGMA-LTPGENSLLIPEEELKRIRQNW 164
>gi|315122105|ref|YP_004062594.1| hypothetical protein CKC_01775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495507|gb|ADR52106.1| hypothetical protein CKC_01775 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 179
Score = 198 bits (502), Expect = 3e-49, Method: Composition-based stats.
Identities = 123/171 (71%), Positives = 143/171 (83%), Gaps = 1/171 (0%)
Query: 1 MISAESD-TSQNFTIVLSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGY 59
++ AES+ Q +TIVLSQ IGL FAHRLL VFDSNK FVAELDGLVVNK+GK KPIGY
Sbjct: 9 VVKAESNCNVQGYTIVLSQWDIGLIFAHRLLTVFDSNKRFVAELDGLVVNKNGKIKPIGY 68
Query: 60 LPSDRLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGI 119
L SDRLKVFEFK P LY+EDQEQVVL SS++E VM +W+ A+ K+ILNEK +PYPFLG+
Sbjct: 69 LRSDRLKVFEFKSPHLYREDQEQVVLFSSTKEYVMRKWHLALRAKDILNEKYLPYPFLGM 128
Query: 120 GKNSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQNNWIRC 170
G+NSNSVASTLI+CMGL+EL IP+AKIAPYQG ILLDD I +IQN+ I C
Sbjct: 129 GENSNSVASTLIKCMGLEELEIPHAKIAPYQGRILLDDSVITQIQNSRIHC 179
>gi|332969447|gb|EGK08469.1| hypothetical protein HMPREF0476_1333 [Kingella kingae ATCC 23330]
Length = 240
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 9 SQNFTIVLSQLT-IGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGYLPSDRLKV 67
S+N+ IV SQL +G H + V D + + V EL+GL ++DG KPIGYLPSDRLKV
Sbjct: 7 SENYRIVKSQLPLVGGMGGHNFIAVLDPSGKVVHELNGLATSEDGAIKPIGYLPSDRLKV 66
Query: 68 FEFKYP--CLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIGKNSNS 125
+ Y Q Q L S E VM ++N + +N++N+PYPF G+GKNSNS
Sbjct: 67 YSETEAGGFFYNPSQRQQTLYEGSYESVMDKYNKGYEAGKKINDQNLPYPFFGLGKNSNS 126
Query: 126 VASTLIRCMGLKELAIPNAKIAPYQGIILLDDR 158
VASTL+ MGL + + NA + P +G +LL ++
Sbjct: 127 VASTLLNQMGLDDPDLGNA-LTPGEGSLLLPEK 158
>gi|21232575|ref|NP_638492.1| hypothetical protein XCC3145 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767351|ref|YP_242113.1| hypothetical protein XC_1019 [Xanthomonas campestris pv. campestris
str. 8004]
gi|21114372|gb|AAM42416.1| hypothetical protein XCC3145 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66572683|gb|AAY48093.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 333
Score = 168 bits (425), Expect = 2e-40, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 22/174 (12%)
Query: 12 FTIVLSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVN-KDGKFKPIGYLPS-DRLKVFE 69
+TI L + H V+ D + +AEL GL + + G+ IG + L+ +
Sbjct: 4 YTIEARSLNVLGVAGHDFWVLRDEQGKALAELHGLATDRQTGEALTIGTDEARHSLRAWN 63
Query: 70 F--------------KYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYP 115
+++Q+ + ++ +++RWN AV LN N+ YP
Sbjct: 64 LALDGAYAASVGTDVSRSTFIEDNQQSRTVVIGDKDEILARWNTAVKAMPELNALNLNYP 123
Query: 116 -----FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQ 164
G NSNS T M L P ++ P G +L + +I E++
Sbjct: 124 KYGFKVFGDTVNSNSAFRTFGELMSLPVEGFP-GRVEPGLGNRMLSEERIEELR 176
>gi|254469764|ref|ZP_05083169.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211961599|gb|EEA96794.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 433
Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 13 TIVLSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGYL--PSDRLKVFEF 70
++ L L + L +H +++ D + +L+G+ + GK P+GY +D ++ F
Sbjct: 15 SLELPVLPLSLPASHIVILAKDPFGNTLWQLNGMSTDTQGKPAPVGYPWDVNDTIQGFFG 74
Query: 71 KYPCL-------YKEDQEQVVLCSSSEECVMSR--WNAAVHTKEILNEKNMPYPFLGIGK 121
P K ++ +E ++ + + +NE+ + Y + +
Sbjct: 75 TNPFDGEVFLDESKMSNYTPIVFGDYDEIKVNGTFYELFEDVTQSINEQGLAYEL--LDQ 132
Query: 122 NSNSVASTLIRCMGLK------ELAIPNAKIAPYQGIILLDDRKINE 162
NSNS A T++R +G+ + + P LL + +
Sbjct: 133 NSNSFAGTVLRALGISPSVWFLNKDLNFTRPVPGFSKDLLPENPSKK 179
>gi|15838567|ref|NP_299255.1| hypothetical protein XF1973 [Xylella fastidiosa 9a5c]
gi|9107079|gb|AAF84775.1|AE004016_9 hypothetical protein XF_1973 [Xylella fastidiosa 9a5c]
Length = 130
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/103 (50%), Positives = 73/103 (70%)
Query: 60 LPSDRLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGI 119
+PSDRLK FEFK LYK Q Q+ L ++++E +++WN A++T ++N KN+PYP GI
Sbjct: 1 MPSDRLKAFEFKSAFLYKSSQAQIALINANKEISLNKWNVALNTITLINTKNLPYPIFGI 60
Query: 120 GKNSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINE 162
G+NSNSV STLIRCM L E IP+ IAP+ G +LL + + +
Sbjct: 61 GRNSNSVTSTLIRCMDLHEPKIPSGGIAPFSGEMLLSEFRNRK 103
>gi|270158753|ref|ZP_06187410.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|289166444|ref|YP_003456582.1| hypothetical protein LLO_3135 [Legionella longbeachae NSW150]
gi|269990778|gb|EEZ97032.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|288859617|emb|CBJ13587.1| hypothetical protein LLO_3135 [Legionella longbeachae NSW150]
Length = 175
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 22/141 (15%)
Query: 18 QLTIGLF--FAHRLLVVFD-SNKEFVAELDGLVVN-KDGKFKPIGYLPSDRLKVFEFKYP 73
QL F H ++ + +K+ VA+L GL + K G IGY LK Y
Sbjct: 12 QLPFLFVNRFVHDFWILREVESKKVVAQLHGLATSRKTGNIVAIGYSREHSLKAHCITYD 71
Query: 74 CLYKE-------DQEQVV----LCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGI--- 119
+ + + ++++C+ W E++N ++ YP G
Sbjct: 72 ADFADLHGLQLGSFALPIHAFHTVYTNKDCLEH-WLRIKAALEVINNLDLDYPPGGFSIP 130
Query: 120 ---GKNSNSVASTLIRCMGLK 137
NSNS+ T + M +
Sbjct: 131 WSSTINSNSIYHTFSQVMDIP 151
>gi|288927472|ref|ZP_06421319.1| putative outer membrane protein, probably involved in nutrient
binding [Prevotella sp. oral taxon 317 str. F0108]
gi|288330306|gb|EFC68890.1| putative outer membrane protein, probably involved in nutrient
binding [Prevotella sp. oral taxon 317 str. F0108]
Length = 1029
Score = 40.1 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 90 EECVMSRWNAA-VHTKEILNEKNMPYPFLGIGKNSNS-VASTL----IRCMGLKELAIPN 143
+ +RW +A + + N PYP L G NSN+ AST R + LK L I
Sbjct: 910 KGITDNRWISADISGTKETENPNAPYPRLSYGSNSNNEQASTFWLRNGRFLRLKNLDIGY 969
Query: 144 AKIAPYQGIILLDDRKINEIQNNWI 168
P+ I L+ +I N I
Sbjct: 970 TMPKPWVNAIHLESARIYISGQNLI 994
>gi|319637800|ref|ZP_07992566.1| hypothetical protein HMPREF0604_00189 [Neisseria mucosa C102]
gi|317400955|gb|EFV81610.1| hypothetical protein HMPREF0604_00189 [Neisseria mucosa C102]
Length = 299
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 13/115 (11%)
Query: 50 KDGKFKPIGYLPS--------DRLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAV 101
+ G K IG + +R + Q+Q + + ++W V
Sbjct: 58 ETGLPKNIGLPYNAQNPDNFNNRKTAWYKSLDKEPISPQKQYRELIAEAPDLSAKWAEMV 117
Query: 102 HTKEILNEKNMPYPFLGIGKNSNSVASTLIRCMGLKELAIP--NAKIAPYQGIIL 154
+ N YP+ + +NSN++A TL+R G E +AP G L
Sbjct: 118 RNAQSKNNI---YPYDYLRQNSNTLADTLLREAGFPEPEKDGIFQHLAPGSGNKL 169
>gi|241589582|ref|YP_002979607.1| hypothetical protein Rpic12D_4716 [Ralstonia pickettii 12D]
gi|240868294|gb|ACS65953.1| hypothetical protein Rpic12D_4716 [Ralstonia pickettii 12D]
Length = 337
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 79 DQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIGKNSNSVASTLIRCMGLKE 138
+S + ++WN V + L +N+PY + +NSNS+A+T + G+
Sbjct: 97 ANPNPSQVVASGADLSTKWNQIVSAENELATENLPYSP--LTQNSNSIANTALTAAGIDT 154
Query: 139 L 139
Sbjct: 155 P 155
>gi|325924124|ref|ZP_08185688.1| hypothetical protein XGA_4748 [Xanthomonas gardneri ATCC 19865]
gi|325545397|gb|EGD16687.1| hypothetical protein XGA_4748 [Xanthomonas gardneri ATCC 19865]
Length = 395
Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 12 FTIVLSQLTIGLFFAHRLLVVFDSN--KEFVAELD----GLVVNKDGKFKPIGYLPSDRL 65
I++ + + D N + + +LD G+ + G + +
Sbjct: 65 GHIIVQAAPYVAPYEVGYRLKQDGNYERVPLNQLDPSDPGIARDVRGDVV------KETI 118
Query: 66 KVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIGKNSNS 125
++ P E ++V S S++ + ++ +AV E +N + Y + NSN
Sbjct: 119 TAPDWPAPGERHE---RIVAWSGSDQELAAKLESAVKAAEQINHAQLEYSP--LYNNSNG 173
Query: 126 VASTLIRCMG----LKELAIPNAKIAPYQGIILLDDRKINEIQNNW 167
VAS L++ G L + A AP G L D +++ +
Sbjct: 174 VASNLLKASGVQPVLPKNAQGETVNAPDFGEDLYQDVGAASVRSGY 219
>gi|285019902|ref|YP_003377613.1| hypothetical protein XALc_3140 [Xanthomonas albilineans GPE PC73]
gi|283475120|emb|CBA17619.1| hypothetical protein XALc_3140 [Xanthomonas albilineans]
Length = 346
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 50 KDGKFKPIGYLPSDRLKVFEFKYPCLYKEDQ--------------------EQVVLCSSS 89
DG +PI P D+ K P L+++ Q E++V+ +
Sbjct: 85 TDGSIRPI---PVDQAKP---DDPALFRDAQGNVVVQQEVAPDWPLPGEKHERLVVWRGT 138
Query: 90 EECVMSRWNAAVHTKEILNEKNMPYPFLGIGKNSNSVASTLIRCMGLKELAIPNAK---- 145
++ + + ++A+ + +N+ + Y + NSN VASTL++ + ++P K
Sbjct: 139 DQELERKLHSALAAGKQINDAKLEYSP--LYNNSNGVASTLLKAADVA-PSLPLGKDGKK 195
Query: 146 -IAPYQGIILLDD 157
AP G L D
Sbjct: 196 VDAPDFGENLYQD 208
>gi|325918471|ref|ZP_08180593.1| hypothetical protein XVE_4622 [Xanthomonas vesicatoria ATCC 35937]
gi|325535331|gb|EGD07205.1| hypothetical protein XVE_4622 [Xanthomonas vesicatoria ATCC 35937]
Length = 395
Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 21/166 (12%)
Query: 12 FTIVLSQLTIGLFFAHRLLVVFDSN--KEFVAELD----GLVVNKDGKFKPIGYLPSDRL 65
I++ + + D N + + +LD G+ + G + +
Sbjct: 65 GHIIVQAAPYVAPYEVGYRLKQDGNYERVPLNQLDPSDPGIARDVRGDVV------KETI 118
Query: 66 KVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIGKNSNS 125
++ P E ++V S S++ + ++ +AV E +N + Y + NSN
Sbjct: 119 TAPDWPAPGERHE---RIVAWSGSDQELAAKLESAVKAGEQINHAQLEYSP--LYNNSNG 173
Query: 126 VASTLIRCMG----LKELAIPNAKIAPYQGIILLDDRKINEIQNNW 167
V S L++ G L + A AP G L D +++ +
Sbjct: 174 VVSNLLKASGVQPVLPKNAQGETVNAPDFGEDLYQDVGAASVRSGY 219
>gi|298369235|ref|ZP_06980553.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
gi|298283238|gb|EFI24725.1| conserved hypothetical protein [Neisseria sp. oral taxon 014 str.
F0314]
Length = 290
Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 27/151 (17%)
Query: 27 HRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGY------LPSDRLKVFEFKYP------- 73
H+ L+ D + + G + P+G LP+ ++ P
Sbjct: 23 HKFLLYTDKTGQR-YTISGWTGEETSPQLPLGKIHIETGLPNHMGLPYDANNPDNFDNRK 81
Query: 74 -CLYKEDQEQVVLCSSSEECVMS-------RWNAAVHTKEILNEKNMPYPFLGIGKNSNS 125
YK ++ + +++ +W V + + YP+ + +NSN+
Sbjct: 82 TAWYKNADKEPISPQKQYRELIAEAPDLSVKWAEMVRNAQSKDNI---YPYDYLRQNSNT 138
Query: 126 VASTLIRCMGLKELAIP--NAKIAPYQGIIL 154
+A TL+R G E +AP G L
Sbjct: 139 LADTLLREAGFPEPEKDGIFRHLAPGSGNRL 169
>gi|145343527|ref|XP_001416372.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576597|gb|ABO94665.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 332
Score = 37.4 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 25/147 (17%)
Query: 37 KEFVAELDGLVVNKDGKF-KPIGYLPSDRLKVFEFKYPCLYKEDQEQVV--LCSSSEECV 93
+++VA L G+ G+ PIG P DRL++ + + +V+ L + + V
Sbjct: 184 RKYVAILSGVPSPSKGRIEAPIGRDPRDRLRMAVTQGGGRFAASNYEVIATLANGNASLV 243
Query: 94 MSRWNAAVHTKEILNEKNMPYPFLGIG---------------------KNSNSVASTLIR 132
R + ++ K++ +P LG K + ++ ST+ R
Sbjct: 244 EWRLETGRTHQIRVHAKHIGHPILGDDTYGGGGGAAVSALSRYGVFDVKEAKALMSTIDR 303
Query: 133 CMGLKELAIPNAKIAPYQGIILLDDRK 159
M L + + + D
Sbjct: 304 PM-LHARTLGFTHPQSGEALDFSRDPP 329
>gi|256822695|ref|YP_003146658.1| diguanylate cyclase with beta propeller sensor [Kangiella koreensis
DSM 16069]
gi|256796234|gb|ACV26890.1| diguanylate cyclase with beta propeller sensor [Kangiella koreensis
DSM 16069]
Length = 1127
Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 68/168 (40%), Gaps = 15/168 (8%)
Query: 11 NFTIVLSQLTIGLFFAHRLL--VVFDSNKEF-VAELDGLVVNKDGKFKPIGYLPSDRLKV 67
N + ++T+ F + + V+ D + V+ +GLV K +PI Y SD L+
Sbjct: 615 NGEVYFQRITVNDGFINDFICSVLSDDSGNLWVSTANGLVKFHPDKGRPINYTYSDGLQY 674
Query: 68 FEFKYPCLYKEDQEQV-------VLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIG 120
EF + ++ + + + E+ ++ + + + E++ +KN+ P G
Sbjct: 675 SEFFTNAHFADNDGYLYFGGLNGISYFNPEDIIIDKEHQPIKITEVI-QKNIRQPL--DG 731
Query: 121 KNSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQNNWI 168
SN++ + I+ + I L +I + +WI
Sbjct: 732 NESNNLYRSTIQYGDIT--DIKFTVFNYVNAKNLEFRYRIEGLTPDWI 777
>gi|308805484|ref|XP_003080054.1| ribosomal large subunit pseudouridine syn (ISS) [Ostreococcus
tauri]
gi|116058513|emb|CAL53702.1| ribosomal large subunit pseudouridine syn (ISS) [Ostreococcus
tauri]
Length = 422
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 37 KEFVAELDGLVVNKDGKF-KPIGYLPSDRLKVFEFKYPCLYKEDQEQVV--LCSSSEECV 93
+ +VA L G+ G+ P+G P DRL++ Y +V+ L S + V
Sbjct: 264 RRYVAILSGVPKTSKGRIEAPVGRDPKDRLRMAVTPGSGRYAASNYEVIATLASGNASLV 323
Query: 94 MSRWNAAVHTKEILNEKNMPYPFLGI 119
R + ++ K++ +P LG
Sbjct: 324 EWRLETGRTHQIRVHAKHIGHPILGD 349
>gi|323170992|gb|EFZ56641.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
LT-68]
Length = 343
Score = 35.5 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTLQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|325928358|ref|ZP_08189554.1| hypothetical protein XPE_3610 [Xanthomonas perforans 91-118]
gi|325541292|gb|EGD12838.1| hypothetical protein XPE_3610 [Xanthomonas perforans 91-118]
Length = 395
Score = 35.5 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 78 EDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMPYPFLGIGKNSNSVASTLIRCMG-- 135
E E++V S S++ + ++ +A+ + +N + Y + NSN V S L++ G
Sbjct: 128 ERHERIVAWSGSDQELSTKLESALKAGDQINHAQLEYSP--LHNNSNGVVSNLLKASGVQ 185
Query: 136 --LKELAIPNAKIAPYQGIILLDDRKINEIQNNW 167
L + A AP G L D +++ +
Sbjct: 186 PVLPKNAQGETVNAPDFGEDLYQDVGAASVRSGY 219
>gi|212704972|ref|ZP_03313100.1| hypothetical protein DESPIG_03039 [Desulfovibrio piger ATCC 29098]
gi|212671636|gb|EEB32119.1| hypothetical protein DESPIG_03039 [Desulfovibrio piger ATCC 29098]
Length = 251
Score = 35.5 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 96 RWNAAVHTKEILNEKNMPYPFLGIGK---NSNSVASTLIRCMGLKELAIPNAKIAPYQGI 152
+ N L + ++ + G+ S ST +RC+ IP ++ +G
Sbjct: 9 KINVYYGASHALQDVSLDFEAGGVTALIGPSGCGKSTFLRCLNRMNDLIPGCRV---EGR 65
Query: 153 ILLDDRKINEIQNNWIR 169
I+LD +N+ + N +R
Sbjct: 66 IMLDGEDVNQPRTNVVR 82
>gi|331681585|ref|ZP_08382222.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
H299]
gi|222032030|emb|CAP74769.1| Methionine import ATP-binding protein metN [Escherichia coli LF82]
gi|312944808|gb|ADR25635.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|315300672|gb|EFU59899.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 16-3]
gi|331081806|gb|EGI52967.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
H299]
Length = 343
Score = 35.5 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKTRR 82
>gi|288817777|ref|YP_003432124.1| hypothetical protein HTH_0459 [Hydrogenobacter thermophilus TK-6]
gi|288787176|dbj|BAI68923.1| hypothetical protein HTH_0459 [Hydrogenobacter thermophilus TK-6]
gi|308751375|gb|ADO44858.1| Nickel transport complex, NikM subunit, transmembrane
[Hydrogenobacter thermophilus TK-6]
Length = 227
Score = 35.1 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 16 LSQLTIGLFFAHRLLVVFDSNKEFVAELDGLVVNKDGKFKPIGYLPSDRLKVFEFKY--- 72
L + L +H L V + ++ + G + G+ K I Y P D LK
Sbjct: 6 LPLILSSLSMSHDLWVEREGSQYALY--YGHLHPVQGEEKFIKYKPEDVLKFECVSSGGK 63
Query: 73 PCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNEKNMP 113
P YK ++ S V++ +++ TK + KN+P
Sbjct: 64 PLQYKFEKSYPARLKGSCGAVLAVFSSGYWTKSVEGLKNLP 104
>gi|333011041|gb|EGK30460.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri K-272]
gi|333021836|gb|EGK41085.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri K-227]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|332768703|gb|EGJ98883.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri 2930-71]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|320668943|gb|EFX35738.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O157:H7 str. LSU-61]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|320196924|gb|EFW71545.1| Methionine ABC transporter ATP-binding protein [Escherichia coli
WV_060327]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|309700407|emb|CBI99696.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
ETEC H10407]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|331671704|ref|ZP_08372502.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
TA280]
gi|331071549|gb|EGI42906.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
TA280]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|331661574|ref|ZP_08362498.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
TA143]
gi|331061489|gb|EGI33452.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
TA143]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|331651105|ref|ZP_08352133.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
M718]
gi|331051559|gb|EGI23608.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
M718]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|301028695|ref|ZP_07191915.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 196-1]
gi|299878294|gb|EFI86505.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 196-1]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|291281022|ref|YP_003497840.1| Methionine import ATP-binding protein metN [Escherichia coli O55:H7
str. CB9615]
gi|290760895|gb|ADD54856.1| Methionine import ATP-binding protein metN [Escherichia coli O55:H7
str. CB9615]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|218698848|ref|YP_002406477.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
IAI39]
gi|218368834|emb|CAR16582.1| DL-methionine transporter subunit ; ATP-binding component of ABC
superfamily [Escherichia coli IAI39]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|170768461|ref|ZP_02902914.1| D-methionine ABC transporter, ATP-binding protein [Escherichia
albertii TW07627]
gi|170122565|gb|EDS91496.1| D-methionine ABC transporter, ATP-binding protein [Escherichia
albertii TW07627]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|82775591|ref|YP_401938.1| DL-methionine transporter ATP-binding subunit [Shigella dysenteriae
Sd197]
gi|309787121|ref|ZP_07681733.1| D-methionine ABC transporter, ATP-binding protein [Shigella
dysenteriae 1617]
gi|122064437|sp|Q32JQ8|METN_SHIDS RecName: Full=Methionine import ATP-binding protein MetN
gi|81239739|gb|ABB60449.1| ATP-binding component of a transporter [Shigella dysenteriae Sd197]
gi|308924699|gb|EFP70194.1| D-methionine ABC transporter, ATP-binding protein [Shigella
dysenteriae 1617]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|30061756|ref|NP_835927.1| DL-methionine transporter ATP-binding subunit [Shigella flexneri 2a
str. 2457T]
gi|30039998|gb|AAP15732.1| ATP-binding component of a transporter [Shigella flexneri 2a str.
2457T]
gi|281599555|gb|ADA72539.1| Methionine import ATP-binding protein metN [Shigella flexneri
2002017]
gi|313646739|gb|EFS11198.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri 2a str. 2457T]
gi|332762042|gb|EGJ92313.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri 2747-71]
gi|332762204|gb|EGJ92473.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri 4343-70]
gi|332765049|gb|EGJ95277.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri K-671]
gi|333009063|gb|EGK28519.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri K-218]
gi|333010695|gb|EGK30128.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri VA-6]
gi|333022214|gb|EGK41453.1| D-methionine ABC transporter, ATP-binding protein [Shigella
flexneri K-304]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|303563|dbj|BAA03660.1| ORF120 [Escherichia coli W3110]
Length = 120
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|16128192|ref|NP_414741.1| DL-methionine transporter subunit [Escherichia coli str. K-12
substr. MG1655]
gi|89107080|ref|AP_000860.1| DL-methionine transporter subunit [Escherichia coli str. K-12
substr. W3110]
gi|170079836|ref|YP_001729156.1| ATP-binding component of DL-methionine uptake transporter (MUT)
[Escherichia coli str. K-12 substr. DH10B]
gi|238899598|ref|YP_002925394.1| DL-methionine transporter subunit [Escherichia coli BW2952]
gi|256025512|ref|ZP_05439377.1| DL-methionine transporter ATP-binding subunit [Escherichia sp.
4_1_40B]
gi|300949766|ref|ZP_07163741.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 116-1]
gi|300956085|ref|ZP_07168409.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 175-1]
gi|301646525|ref|ZP_07246399.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 146-1]
gi|307136800|ref|ZP_07496156.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
H736]
gi|331640654|ref|ZP_08341802.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
H736]
gi|2506097|sp|P30750|METN_ECOLI RecName: Full=Methionine import ATP-binding protein MetN
gi|195927581|pdb|3DHW|C Chain C, Crystal Structure Of Methionine Importer Metni
gi|195927582|pdb|3DHW|D Chain D, Crystal Structure Of Methionine Importer Metni
gi|195927585|pdb|3DHW|G Chain G, Crystal Structure Of Methionine Importer Metni
gi|195927586|pdb|3DHW|H Chain H, Crystal Structure Of Methionine Importer Metni
gi|1552775|gb|AAB08627.1| ATP-binding protein [Escherichia coli]
gi|1786398|gb|AAC73310.1| DL-methionine transporter subunit [Escherichia coli str. K-12
substr. MG1655]
gi|85674381|dbj|BAA77876.2| DL-methionine transporter subunit [Escherichia coli str. K12
substr. W3110]
gi|169887671|gb|ACB01378.1| ATP-binding component of DL-methionine uptake transporter (MUT)
[Escherichia coli str. K-12 substr. DH10B]
gi|238860786|gb|ACR62784.1| DL-methionine transporter subunit [Escherichia coli BW2952]
gi|260450597|gb|ACX41019.1| D-methionine ABC transporter, ATPase subunit [Escherichia coli DH1]
gi|300317079|gb|EFJ66863.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 175-1]
gi|300450831|gb|EFK14451.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 116-1]
gi|301075278|gb|EFK90084.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 146-1]
gi|315134890|dbj|BAJ42049.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
DH1]
gi|315616315|gb|EFU96933.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
3431]
gi|323939924|gb|EGB36122.1| D-methionine ABC transporter [Escherichia coli E482]
gi|331040400|gb|EGI12607.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
H736]
gi|332341533|gb|AEE54867.1| DL-methionine transporter subunit MetN [Escherichia coli UMNK88]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|110640420|ref|YP_668148.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
536]
gi|170681875|ref|YP_001742328.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
SMS-3-5]
gi|191171442|ref|ZP_03032991.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
F11]
gi|218547655|ref|YP_002381446.1| DL-methionine transporter ATP-binding subunit [Escherichia
fergusonii ATCC 35469]
gi|300990447|ref|ZP_07179215.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 200-1]
gi|122064412|sp|Q0TLD2|METN_ECOL5 RecName: Full=Methionine import ATP-binding protein MetN
gi|110342012|gb|ABG68249.1| ABC transporter ATP-binding protein [Escherichia coli 536]
gi|170519593|gb|ACB17771.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
SMS-3-5]
gi|190908376|gb|EDV67966.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
F11]
gi|218355196|emb|CAQ87803.1| DL-methionine transporter subunit ; ATP-binding component of ABC
superfamily [Escherichia fergusonii ATCC 35469]
gi|300305747|gb|EFJ60267.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 200-1]
gi|323964907|gb|EGB60373.1| D-methionine ABC transporter [Escherichia coli M863]
gi|323975632|gb|EGB70728.1| D-methionine ABC transporter [Escherichia coli TW10509]
gi|324008231|gb|EGB77450.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 57-2]
gi|324014115|gb|EGB83334.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 60-1]
gi|327255179|gb|EGE66782.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
STEC_7v]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|15799881|ref|NP_285893.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O157:H7 EDL933]
gi|15829455|ref|NP_308228.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O157:H7 str. Sakai]
gi|26246149|ref|NP_752188.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
CFT073]
gi|74310820|ref|YP_309239.1| DL-methionine transporter ATP-binding subunit [Shigella sonnei
Ss046]
gi|91209270|ref|YP_539256.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
UTI89]
gi|117622484|ref|YP_851397.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
APEC O1]
gi|157158405|ref|YP_001461370.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
E24377A]
gi|157159666|ref|YP_001456984.1| DL-methionine transporter ATP-binding subunit [Escherichia coli HS]
gi|168758724|ref|ZP_02783731.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4401]
gi|168769968|ref|ZP_02794975.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4486]
gi|168777692|ref|ZP_02802699.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4196]
gi|168782930|ref|ZP_02807937.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4076]
gi|168789310|ref|ZP_02814317.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC869]
gi|170021447|ref|YP_001726401.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
ATCC 8739]
gi|187730198|ref|YP_001879002.1| DL-methionine transporter ATP-binding subunit [Shigella boydii CDC
3083-94]
gi|188494654|ref|ZP_03001924.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
53638]
gi|191167009|ref|ZP_03028831.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
B7A]
gi|193063253|ref|ZP_03044344.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
E22]
gi|193067583|ref|ZP_03048550.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
E110019]
gi|194428249|ref|ZP_03060791.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
B171]
gi|194439918|ref|ZP_03071980.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
101-1]
gi|195939896|ref|ZP_03085278.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O157:H7 str. EC4024]
gi|208808805|ref|ZP_03251142.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4206]
gi|208812745|ref|ZP_03254074.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4045]
gi|208819172|ref|ZP_03259492.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4042]
gi|209399329|ref|YP_002268808.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4115]
gi|209917392|ref|YP_002291476.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
SE11]
gi|215485361|ref|YP_002327792.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O127:H6 str. E2348/69]
gi|217326003|ref|ZP_03442087.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. TW14588]
gi|218552780|ref|YP_002385693.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
IAI1]
gi|218557141|ref|YP_002390054.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
S88]
gi|218688075|ref|YP_002396287.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
ED1a]
gi|218693665|ref|YP_002401332.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
55989]
gi|218703454|ref|YP_002410973.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
UMN026]
gi|227884887|ref|ZP_04002692.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Escherichia coli 83972]
gi|237704359|ref|ZP_04534840.1| DL-methionine transporter ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|253774773|ref|YP_003037604.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254037619|ref|ZP_04871696.1| D-methionine ABC transporter [Escherichia sp. 1_1_43]
gi|254160319|ref|YP_003043427.1| DL-methionine transporter ATP-binding subunit [Escherichia coli B
str. REL606]
gi|254791332|ref|YP_003076169.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O157:H7 str. TW14359]
gi|256021633|ref|ZP_05435498.1| DL-methionine transporter ATP-binding subunit [Shigella sp. D9]
gi|260842431|ref|YP_003220209.1| DL-methionine transporter subunit MetN [Escherichia coli O103:H2
str. 12009]
gi|260853410|ref|YP_003227301.1| DL-methionine transporter subunit MetN [Escherichia coli O26:H11
str. 11368]
gi|260866348|ref|YP_003232750.1| DL-methionine transporter subunit MetN [Escherichia coli O111:H-
str. 11128]
gi|261226954|ref|ZP_05941235.1| D- and L-methionine transport protein (ABC superfamily, atp_bind)
[Escherichia coli O157:H7 str. FRIK2000]
gi|261255358|ref|ZP_05947891.1| DL-methionine transporter subunit MetN [Escherichia coli O157:H7
str. FRIK966]
gi|293403269|ref|ZP_06647366.1| metN [Escherichia coli FVEC1412]
gi|293408292|ref|ZP_06652132.1| D-methionine ABC transporter [Escherichia coli B354]
gi|293418085|ref|ZP_06660707.1| D-methionine ABC transporter [Escherichia coli B185]
gi|293476858|ref|ZP_06665266.1| D-methionine ABC transporter [Escherichia coli B088]
gi|297518579|ref|ZP_06936965.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
OP50]
gi|298378805|ref|ZP_06988689.1| D-methionine transport system ATP-binding protein [Escherichia coli
FVEC1302]
gi|300900758|ref|ZP_07118904.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 198-1]
gi|300902020|ref|ZP_07120047.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 84-1]
gi|300920113|ref|ZP_07136566.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 115-1]
gi|300921809|ref|ZP_07137969.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 182-1]
gi|300932158|ref|ZP_07147441.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 187-1]
gi|300938609|ref|ZP_07153341.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 21-1]
gi|300977730|ref|ZP_07174024.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 45-1]
gi|301025914|ref|ZP_07189400.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 69-1]
gi|301046659|ref|ZP_07193790.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 185-1]
gi|301325165|ref|ZP_07218695.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 78-1]
gi|306815201|ref|ZP_07449350.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
NC101]
gi|307311352|ref|ZP_07590994.1| D-methionine ABC transporter, ATPase subunit [Escherichia coli W]
gi|309796378|ref|ZP_07690787.1| hypothetical protein HMPREF9348_03609 [Escherichia coli MS 145-7]
gi|312966337|ref|ZP_07780563.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
2362-75]
gi|312970301|ref|ZP_07784483.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
1827-70]
gi|331645343|ref|ZP_08346454.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
M605]
gi|331661271|ref|ZP_08362203.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
TA206]
gi|331666445|ref|ZP_08367326.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
TA271]
gi|331680781|ref|ZP_08381440.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
H591]
gi|332282874|ref|ZP_08395287.1| DL-methionine transporter subunit [Shigella sp. D9]
gi|54037776|sp|P63356|METN_ECO57 RecName: Full=Methionine import ATP-binding protein MetN
gi|54041243|sp|P63355|METN_ECOL6 RecName: Full=Methionine import ATP-binding protein MetN
gi|122064413|sp|Q1RFY9|METN_ECOUT RecName: Full=Methionine import ATP-binding protein MetN
gi|122064438|sp|Q3Z5F8|METN_SHISS RecName: Full=Methionine import ATP-binding protein MetN
gi|12512930|gb|AAG54501.1|AE005195_10 ATP-binding component of a transporter [Escherichia coli O157:H7
str. EDL933]
gi|26106546|gb|AAN78732.1|AE016755_232 D-methionine transport ATP-binding protein metN [Escherichia coli
CFT073]
gi|13359657|dbj|BAB33624.1| ATP-binding component of a transporter [Escherichia coli O157:H7
str. Sakai]
gi|73854297|gb|AAZ87004.1| ATP-binding component of a transporter [Shigella sonnei Ss046]
gi|91070844|gb|ABE05725.1| D-methionine transport ATP-binding protein MetN [Escherichia coli
UTI89]
gi|115511608|gb|ABI99682.1| DL-methionine transporter subunit [Escherichia coli APEC O1]
gi|157065346|gb|ABV04601.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
HS]
gi|157080435|gb|ABV20143.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
E24377A]
gi|169756375|gb|ACA79074.1| D-methionine ABC transporter, ATPase subunit [Escherichia coli ATCC
8739]
gi|187427190|gb|ACD06464.1| D-methionine ABC transporter, ATP-binding protein [Shigella boydii
CDC 3083-94]
gi|187767105|gb|EDU30949.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4196]
gi|188489853|gb|EDU64956.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
53638]
gi|188999594|gb|EDU68580.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4076]
gi|189354508|gb|EDU72927.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4401]
gi|189361048|gb|EDU79467.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4486]
gi|189371062|gb|EDU89478.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC869]
gi|190902902|gb|EDV62629.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
B7A]
gi|192931161|gb|EDV83764.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
E22]
gi|192958995|gb|EDV89431.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
E110019]
gi|194413624|gb|EDX29904.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
B171]
gi|194421164|gb|EDX37189.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
101-1]
gi|208728606|gb|EDZ78207.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4206]
gi|208734022|gb|EDZ82709.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4045]
gi|208739295|gb|EDZ86977.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4042]
gi|209160729|gb|ACI38162.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. EC4115]
gi|209745574|gb|ACI71094.1| ATP-binding component of a transporter [Escherichia coli]
gi|209745576|gb|ACI71095.1| ATP-binding component of a transporter [Escherichia coli]
gi|209745578|gb|ACI71096.1| ATP-binding component of a transporter [Escherichia coli]
gi|209745580|gb|ACI71097.1| ATP-binding component of a transporter [Escherichia coli]
gi|209745582|gb|ACI71098.1| ATP-binding component of a transporter [Escherichia coli]
gi|209910651|dbj|BAG75725.1| methionine ABC transporter ATP-binding component [Escherichia coli
SE11]
gi|215263433|emb|CAS07753.1| DL-methionine transporter subunit MetN, ATP-binding component of
ABC superfamily [Escherichia coli O127:H6 str. E2348/69]
gi|217322224|gb|EEC30648.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
O157:H7 str. TW14588]
gi|218350397|emb|CAU96082.1| DL-methionine transporter subunit ; ATP-binding component of ABC
superfamily [Escherichia coli 55989]
gi|218359548|emb|CAQ97088.1| DL-methionine transporter subunit ; ATP-binding component of ABC
superfamily [Escherichia coli IAI1]
gi|218363910|emb|CAR01575.1| DL-methionine transporter subunit ; ATP-binding component of ABC
superfamily [Escherichia coli S88]
gi|218425639|emb|CAR06425.1| DL-methionine transporter subunit ; ATP-binding component of ABC
superfamily [Escherichia coli ED1a]
gi|218430551|emb|CAR11417.1| DL-methionine transporter subunit ; ATP-binding component of ABC
superfamily [Escherichia coli UMN026]
gi|226840725|gb|EEH72727.1| D-methionine ABC transporter [Escherichia sp. 1_1_43]
gi|226902271|gb|EEH88530.1| DL-methionine transporter ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|227838136|gb|EEJ48602.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Escherichia coli 83972]
gi|242376031|emb|CAQ30714.1| metN, subunit of L-and D-methionine uptake ABC permease
[Escherichia coli BL21(DE3)]
gi|253325817|gb|ACT30419.1| D-methionine ABC transporter, ATPase subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972220|gb|ACT37891.1| DL-methionine transporter subunit [Escherichia coli B str. REL606]
gi|253976429|gb|ACT42099.1| DL-methionine transporter subunit [Escherichia coli BL21(DE3)]
gi|254590732|gb|ACT70093.1| D- and L-methionine transport protein (ABC superfamily, atp_bind)
[Escherichia coli O157:H7 str. TW14359]
gi|257752059|dbj|BAI23561.1| DL-methionine transporter subunit MetN [Escherichia coli O26:H11
str. 11368]
gi|257757578|dbj|BAI29075.1| DL-methionine transporter subunit MetN [Escherichia coli O103:H2
str. 12009]
gi|257762704|dbj|BAI34199.1| DL-methionine transporter subunit MetN [Escherichia coli O111:H-
str. 11128]
gi|281177425|dbj|BAI53755.1| methionine ABC transporter ATP-binding component [Escherichia coli
SE15]
gi|284919975|emb|CBG33030.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
042]
gi|291321311|gb|EFE60753.1| D-methionine ABC transporter [Escherichia coli B088]
gi|291430184|gb|EFF03198.1| metN [Escherichia coli FVEC1412]
gi|291430803|gb|EFF03801.1| D-methionine ABC transporter [Escherichia coli B185]
gi|291472543|gb|EFF15025.1| D-methionine ABC transporter [Escherichia coli B354]
gi|294493997|gb|ADE92753.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
IHE3034]
gi|298281139|gb|EFI22640.1| D-methionine transport system ATP-binding protein [Escherichia coli
FVEC1302]
gi|300301394|gb|EFJ57779.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 185-1]
gi|300355743|gb|EFJ71613.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 198-1]
gi|300395769|gb|EFJ79307.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 69-1]
gi|300405906|gb|EFJ89444.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 84-1]
gi|300409815|gb|EFJ93353.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 45-1]
gi|300412847|gb|EFJ96157.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 115-1]
gi|300421804|gb|EFK05115.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 182-1]
gi|300456455|gb|EFK19948.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 21-1]
gi|300460095|gb|EFK23588.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 187-1]
gi|300847971|gb|EFK75731.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 78-1]
gi|305850863|gb|EFM51318.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
NC101]
gi|306908331|gb|EFN38829.1| D-methionine ABC transporter, ATPase subunit [Escherichia coli W]
gi|307552052|gb|ADN44827.1| D-methionine transport ATP-binding protein MetN [Escherichia coli
ABU 83972]
gi|307629776|gb|ADN74080.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
UM146]
gi|308120082|gb|EFO57344.1| hypothetical protein HMPREF9348_03609 [Escherichia coli MS 145-7]
gi|310337799|gb|EFQ02910.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
1827-70]
gi|312289580|gb|EFR17474.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
2362-75]
gi|315059418|gb|ADT73745.1| DL-methionine transporter subunit [Escherichia coli W]
gi|315285267|gb|EFU44712.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 110-3]
gi|315295527|gb|EFU54853.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 153-1]
gi|320173319|gb|EFW48522.1| Methionine ABC transporter ATP-binding protein [Shigella
dysenteriae CDC 74-1112]
gi|320180892|gb|EFW55814.1| Methionine ABC transporter ATP-binding protein [Shigella boydii
ATCC 9905]
gi|320186622|gb|EFW61347.1| Methionine ABC transporter ATP-binding protein [Shigella flexneri
CDC 796-83]
gi|320190274|gb|EFW64924.1| Methionine ABC transporter ATP-binding protein [Escherichia coli
O157:H7 str. EC1212]
gi|320200273|gb|EFW74859.1| Methionine ABC transporter ATP-binding protein [Escherichia coli
EC4100B]
gi|320640006|gb|EFX09591.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O157:H7 str. G5101]
gi|320644776|gb|EFX13820.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O157:H- str. 493-89]
gi|320652932|gb|EFX21170.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O157:H- str. H 2687]
gi|320658320|gb|EFX26049.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320663630|gb|EFX30914.1| DL-methionine transporter ATP-binding subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|323157961|gb|EFZ44063.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
EPECa14]
gi|323160231|gb|EFZ46189.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
E128010]
gi|323165904|gb|EFZ51686.1| D-methionine ABC transporter, ATP-binding protein [Shigella sonnei
53G]
gi|323176517|gb|EFZ62109.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
1180]
gi|323181617|gb|EFZ67032.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
1357]
gi|323190400|gb|EFZ75675.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
RN587/1]
gi|323380023|gb|ADX52291.1| D-methionine ABC transporter, ATPase subunit [Escherichia coli
KO11]
gi|323935040|gb|EGB31413.1| D-methionine ABC transporter [Escherichia coli E1520]
gi|323945678|gb|EGB41727.1| D-methionine ABC transporter [Escherichia coli H120]
gi|323950801|gb|EGB46678.1| D-methionine ABC transporter [Escherichia coli H252]
gi|323955082|gb|EGB50858.1| D-methionine ABC transporter [Escherichia coli H263]
gi|323959961|gb|EGB55608.1| D-methionine ABC transporter [Escherichia coli H489]
gi|323970679|gb|EGB65935.1| D-methionine ABC transporter [Escherichia coli TA007]
gi|324019410|gb|EGB88629.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
MS 117-3]
gi|324112389|gb|EGC06366.1| D-methionine ABC transporter [Escherichia fergusonii B253]
gi|324118321|gb|EGC12216.1| D-methionine ABC transporter [Escherichia coli E1167]
gi|326339745|gb|EGD63553.1| Methionine ABC transporter ATP-binding protein [Escherichia coli
O157:H7 str. 1044]
gi|326345079|gb|EGD68822.1| Methionine ABC transporter ATP-binding protein [Escherichia coli
O157:H7 str. 1125]
gi|330910050|gb|EGH38560.1| methionine ABC transporter ATP-binding protein [Escherichia coli
AA86]
gi|331046100|gb|EGI18219.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
M605]
gi|331052313|gb|EGI24352.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
TA206]
gi|331066656|gb|EGI38533.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
TA271]
gi|331072244|gb|EGI43580.1| D-methionine ABC transporter, ATP-binding protein [Escherichia coli
H591]
gi|332095142|gb|EGJ00174.1| D-methionine ABC transporter, ATP-binding protein [Shigella boydii
5216-82]
gi|332097617|gb|EGJ02594.1| D-methionine ABC transporter, ATP-binding protein [Shigella
dysenteriae 155-74]
gi|332105226|gb|EGJ08572.1| DL-methionine transporter subunit [Shigella sp. D9]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|82542798|ref|YP_406745.1| DL-methionine transporter ATP-binding subunit [Shigella boydii
Sb227]
gi|122064436|sp|Q325U1|METN_SHIBS RecName: Full=Methionine import ATP-binding protein MetN
gi|81244209|gb|ABB64917.1| ATP-binding component of a transporter [Shigella boydii Sb227]
gi|332098753|gb|EGJ03713.1| D-methionine ABC transporter, ATP-binding protein [Shigella boydii
3594-74]
Length = 343
Score = 35.1 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRIIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|283783988|ref|YP_003363853.1| D-methionine ABC transporter ATP-binding protein [Citrobacter
rodentium ICC168]
gi|282947442|emb|CBG86989.1| D-methionine ABC transporter, ATP-binding protein [Citrobacter
rodentium ICC168]
Length = 343
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
+ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FQQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSEAELTKARR 82
>gi|157147368|ref|YP_001454687.1| DL-methionine transporter ATP-binding subunit [Citrobacter koseri
ATCC BAA-895]
gi|157084573|gb|ABV14251.1| hypothetical protein CKO_03166 [Citrobacter koseri ATCC BAA-895]
Length = 343
Score = 35.1 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
+ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FQQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVGGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|145169|gb|AAC36869.1| putative [Escherichia coli]
gi|739998|prf||2004284B abc gene
Length = 203
Score = 35.1 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 97 WNAAVHTKEILNEKNMPYP---FLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGII 153
++ T + LN ++ P G+ S + STLIRC+ L E + + Q +
Sbjct: 11 FHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELT 70
Query: 154 LLDDRKINEIQN 165
L + ++ + +
Sbjct: 71 TLSESELTKARR 82
>gi|315186040|gb|EFU19803.1| PP-loop domain protein [Spirochaeta thermophila DSM 6578]
Length = 276
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 4/116 (3%)
Query: 56 PIGYLPSDRLKVFEFKYPCLYKEDQEQVVLCSSSEECVMSRWNAAVHTKEILNE--KNMP 113
PI +DRL + Q + + + + A + K +L K
Sbjct: 85 PISDEETDRLAAYF--DAIDVPFTQITTTMFPGHYDGQFNCYLCARNRKRLLFTYMKEHD 142
Query: 114 YPFLGIGKNSNSVASTLIRCMGLKELAIPNAKIAPYQGIILLDDRKINEIQNNWIR 169
P L +G + + + T + M ++ + P+ G + R + E+ + +R
Sbjct: 143 IPILALGHHLDDIVETTLINMAMRGRLFTMMPVQPFFGGLFTLIRPLCEVPESQVR 198
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.130 0.323
Lambda K H
0.267 0.0396 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,044,894,673
Number of Sequences: 14124377
Number of extensions: 26807996
Number of successful extensions: 83241
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 83211
Number of HSP's gapped (non-prelim): 50
length of query: 171
length of database: 4,842,793,630
effective HSP length: 129
effective length of query: 42
effective length of database: 3,020,748,997
effective search space: 126871457874
effective search space used: 126871457874
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 76 (33.9 bits)