RPSBLAST alignment of GI: 254780449 and protein with PDBid: 2pff
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688
Score = 59.4 bits (143), Expect = 2e-09
Identities = 101/436 (23%), Positives = 169/436 (38%), Gaps = 106/436 (24%)
Query: 62 STKVKDVAVDVAVS---MIPIYGTYREFKK-GNYGWGIVGAISD-----------AALLI 106
S + D+ V+ +S I I G Y +F++ G++ +G + A S+ A +
Sbjct: 1109 SVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSR 1168
Query: 107 PVV----GY--GARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKE 160
P G+ A I ++ +ALK G I A A AT+K + +
Sbjct: 1169 PATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVA----MAATATDKIGRSVPAPGK 1224
Query: 161 GITSIRTIEGSSVTIKSESIGTK----------ASISSTNTAEKSAI---SQKITTNSTT 207
GI + SSV S ++ K A I E A+ +++I +
Sbjct: 1225 GILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQN 1284
Query: 208 E--IGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKI--FSNTIKN 263
E + +T E+ E+ SQL + Q W K DP + + RG + + TI +
Sbjct: 1285 EFLLERTREIHNEA----ESQLRAAQQQ--WGNDFYKRDPRIAPL--RGALATYGLTIDD 1336
Query: 264 NAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQT----LFRDF-----QG 314
+TKA DK N+ IN K + S+ +F+ F +G
Sbjct: 1337 LGVASFHGTSTKANDK------NESATINEM---MKHLGRSEGNPVIGVFQKFLTGHPKG 1387
Query: 315 LCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQF--AKNP-KQLQL------ 365
G + +N A I N + + +A+ + K++ QF P K L+
Sbjct: 1388 AAGAWM-------MNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAV 1440
Query: 366 -ISSY-----ANQSIFADSVVH---LMQSIPE--FAKYASKSGSASKFTAKTLTNGEV-- 412
I+S+ Q+I VVH L +I E + +Y +K + K K NG +
Sbjct: 1441 SITSFGFGQKGGQAI----VVHPDYLYGAITEDRYNEYVAKVSAREKSAYKFFHNGMIYN 1496
Query: 413 -AFTAK----YTTKVQ 423
F +K YT +++
Sbjct: 1497 KLFVSKEHAPYTDELE 1512