HHsearch alignment for GI: 254780450 and conserved domain: COG2197

>COG2197 CitB Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].

Probab=99.77  E-value=3.9e-17  Score=138.69  Aligned_cols=118  Identities=29%  Similarity=0.466  Sum_probs=107.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCC-CEEE-EECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             69997698899999999999889-8999-989989998999865999548998587889888999999998689982999
Q gi|254780450|r  683 IVLLVEDEDSVRRGSKRMLETRG-YTVH-EAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIF  760 (803)
Q Consensus       683 ~iLvvdD~~~~~~~~~~~L~~~g-~~v~-~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~  760 (803)
T Consensus         2 ~vlivDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~~~l~~~~~~--~pdvvl~Dl~mP~~~G~e~~~~l~~~~p~~~vvv   79 (211)
T COG2197           2 KVLIVDDHPLVREGLRQLLELEPDLEVVGEASNGEEALDLAREL--KPDVVLLDLSMPGMDGLEALKQLRARGPDIKVVV   79 (211)
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCC--CCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf             49998097779999999998689966999827889999985137--9988998378899875999999998689972999


Q ss_pred             EECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
Q ss_conf             906785899876760579807507979999999999985137
Q gi|254780450|r  761 ISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQSD  802 (803)
Q Consensus       761 ~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~~  802 (803)
T Consensus        80 lt~~~~~~~v~~~l~~Ga~gyl~K~~~~~~l~~ai~~v~~G~  121 (211)
T COG2197          80 LTAHDDPAYVIRALRAGADGYLLKDASPEELVEAIRAVAAGG  121 (211)
T ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
T ss_conf             967789899999997799699867999999999999997588