HHsearch alignment for GI: 254780450 and conserved domain: COG3290

>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].
Probab=97.70  E-value=0.005  Score=39.27  Aligned_cols=120  Identities=15%  Similarity=0.153  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEHHHHHHHCCCCHHH--HCCCCCCHHHHCCCH-HHHHHHHHHHHHCCC
Q ss_conf             99999999999998525961999929996897646798642999678--045632188808820-489999998620026
Q gi|254780450|r  153 EKFFRELQNAIDYLDHSPVGFMSADHQGKILYINATLAEWIGIDLTT--FTSKSISIGDITAGE-GLALIQAIRTEPSHQ  229 (803)
Q Consensus       153 e~l~~~~~~~~~~le~a~~gi~~~D~~g~i~~~N~~~~~llG~~~~e--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  229 (803)
T Consensus       208 ~EIa~l~~er~A~l~si~EGviAvd~~G~It~~N~~A~~ll~~~~~~~~~ig--~~i~~v~~p~~~l~~v---l~----~  278 (537)
T COG3290         208 EEIATLLEERQAMLQSIKEGVIAVDKKGVITLINQAAQKLLGLRQPSGDPIG--RSIVEVLPPDSDLPEV---LE----T  278 (537)
T ss_pred             HHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCC--CCCEEEECCCCCCHHH---HH----C
T ss_conf             9999999999999987636289987898576112889998465676756446--6103761563675778---75----0


Q ss_pred             CEEEEEEEEEEEECCEEEEEEEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHH
Q ss_conf             714888999980489799999955676538885547999998607899999999999
Q gi|254780450|r  230 KITTLDLDLRRIDNGHGIPVKIVHHILASCDGKPGESRTVVVSRKNCDSGDPSGTIA  286 (803)
Q Consensus       230 ~~~~~e~~~~~~~~g~~~~v~~~~~~~~~~~G~~~~~~~~~~Dit~~k~~e~~l~~s  286 (803)
T Consensus       279 ~~~~~~~e~--~~ng~~~---i~nr~pI~~~~~~~GaI~tFRdktei~~L~eqLt~v  330 (537)
T COG3290         279 GKPQHDEEI--RINGRLL---VANRVPIRSGGQIVGAIITFRDKTEIKKLTEQLTGV  330 (537)
T ss_pred             CCCCCCHHH--HCCCEEE---EEEECCEEECCEEEEEEEEEECHHHHHHHHHHHHHH
T ss_conf             776311344--1477599---998523788897768999876377899999999989