HHsearch alignment for GI: 254780450 and conserved domain: COG3290
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].
Probab=97.70 E-value=0.005 Score=39.27 Aligned_cols=120 Identities=15% Similarity=0.153 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEHHHHHHHCCCCHHH--HCCCCCCHHHHCCCH-HHHHHHHHHHHHCCC
Q ss_conf 99999999999998525961999929996897646798642999678--045632188808820-489999998620026
Q gi|254780450|r 153 EKFFRELQNAIDYLDHSPVGFMSADHQGKILYINATLAEWIGIDLTT--FTSKSISIGDITAGE-GLALIQAIRTEPSHQ 229 (803)
Q Consensus 153 e~l~~~~~~~~~~le~a~~gi~~~D~~g~i~~~N~~~~~llG~~~~e--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 229 (803)
T Consensus 208 ~EIa~l~~er~A~l~si~EGviAvd~~G~It~~N~~A~~ll~~~~~~~~~ig--~~i~~v~~p~~~l~~v---l~----~ 278 (537)
T COG3290 208 EEIATLLEERQAMLQSIKEGVIAVDKKGVITLINQAAQKLLGLRQPSGDPIG--RSIVEVLPPDSDLPEV---LE----T 278 (537)
T ss_pred HHHHHHHHHHHHHHHHHHCEEEEECCCCEEEEHHHHHHHHHCCCCCCCCCCC--CCCEEEECCCCCCHHH---HH----C
T ss_conf 9999999999999987636289987898576112889998465676756446--6103761563675778---75----0
Q ss_pred CEEEEEEEEEEEECCEEEEEEEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHH
Q ss_conf 714888999980489799999955676538885547999998607899999999999
Q gi|254780450|r 230 KITTLDLDLRRIDNGHGIPVKIVHHILASCDGKPGESRTVVVSRKNCDSGDPSGTIA 286 (803)
Q Consensus 230 ~~~~~e~~~~~~~~g~~~~v~~~~~~~~~~~G~~~~~~~~~~Dit~~k~~e~~l~~s 286 (803)
T Consensus 279 ~~~~~~~e~--~~ng~~~---i~nr~pI~~~~~~~GaI~tFRdktei~~L~eqLt~v 330 (537)
T COG3290 279 GKPQHDEEI--RINGRLL---VANRVPIRSGGQIVGAIITFRDKTEIKKLTEQLTGV 330 (537)
T ss_pred CCCCCCHHH--HCCCEEE---EEEECCEEECCEEEEEEEEEECHHHHHHHHHHHHHH
T ss_conf 776311344--1477599---998523788897768999876377899999999989