HHsearch alignment for GI: 254780450 and conserved domain: PRK09303
>PRK09303 adaptive-response sensory kinase; Validated.
Probab=100.00 E-value=0 Score=385.74 Aligned_cols=221 Identities=30% Similarity=0.380 Sum_probs=179.2
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCCCC--
Q ss_conf 44444687630342566415899999999998507--998478888999999----9888876430045421200584--
Q gi|254780450|r 415 QKLNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQS--RSSDASFADLMEIKH----NANRAAILVRQLLAFSRKQTMR-- 486 (803)
Q Consensus 415 ~~~~a~~~~~a~isHelr~pL~~I~g~~~ll~~~~--~~~~~~~~~l~~i~~----~~~r~~~li~~lLd~sr~~~~~-- 486 (803)
T Consensus 144 e~~r~K~~Fla~vSHELRTPLTaI~g~~e~L~~~~~~~~~~~~~~~l~~l~~~~~~~~~~L~~LI~DLLd~sr~e~g~l~ 223 (378)
T PRK09303 144 EQLKFKDRLLAMLAHDLRTPLTAASLAVETLELGQIDPSEELSPALIEQLQDQARRQLEEIERLITDLLEVGRTRWEALQ 223 (378)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 99999999999736761531999999999986425797416679999999999999999999999999999887538863
Q ss_pred --EEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCC-CCCEEEEEEEEC
Q ss_conf --35853467899999999875035681699981489722699871699999999874227652067-885799999850
Q gi|254780450|r 487 --LTVLNLTEVIGNLRMMIQKLISEPPQVKLTVDYERDLWGVKTDLSQFEQVLVNLCVNAHHAIMLK-ESGSLTVRTRNI 563 (803)
Q Consensus 487 --~~~~~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~D~~~l~qvl~NLl~NA~~A~~~~-~~G~v~i~~~~~ 563 (803)
T Consensus 224 l~~~~~dL~~lv~evi~~~~~~a~-~k~i~l~~dip~dlp~V~aD~~rL~QVl~NLL~N---AiKyT~~gG~I~I~~~~- 298 (378)
T PRK09303 224 FNPQKLDLGSLCQEVILELEKRWL-AKSLEIQTDIPSDLPSVYADQRRIRQVLLNLLDN---AIKYTPEGGTITLTMLH- 298 (378)
T ss_pred EEEEEECHHHHHHHHHHHHHHHHH-HCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHH---HHHHCCCCCEEEEEEEE-
T ss_conf 146887699999999999898998-3897899976899972876899999999999999---99858999869999998-
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCC--CCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf 42101224556678897899999978866884454202322221013--5776530388999998516754999961889
Q gi|254780450|r 564 PSTEIHTFNYSDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFFTTKK--VGEGTGLGLSVVYGIIRQSGGYILPESEVGK 641 (803)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~ttk~--~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~ 641 (803)
T Consensus 299 -------------~~~~~V~isV~DtG~GIp~e~~~rIFe~F~R~~~s~~~~GtGLGLaIvk~IVe~HgG~I~V~S~~g~ 365 (378)
T PRK09303 299 -------------RTTQKVQVSICDTGPGIPEEEQERIFEDRVRLPRDEGTEGYGIGLSVCRRIVEVHYGQIWVDSEPGQ 365 (378)
T ss_pred -------------ECCCEEEEEEEEECCCCCHHHHHHHCCCCEECCCCCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf -------------1399899999980788898999875636344568999883127999999999987997999943998
Q ss_pred CEEEEEEECCCC
Q ss_conf 429999943757
Q gi|254780450|r 642 GTIFRIFLPRYV 653 (803)
Q Consensus 642 Gt~F~i~lP~~~ 653 (803)
T Consensus 366 GS~Ft~tLPv~r 377 (378)
T PRK09303 366 GSCFHFTLPVYR 377 (378)
T ss_pred CEEEEEEEECCC
T ss_conf 359999982478