HHsearch alignment for GI: 254780450 and conserved domain: PRK09776
>PRK09776 putative sensor protein; Provisional.
Probab=100.00 E-value=5.5e-44 Score=327.99 Aligned_cols=386 Identities=11% Similarity=0.080 Sum_probs=315.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHCCCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 99862118999999852498099995999389810668867099956731561100027876167899999998324323
Q gi|254780450|r 19 EMTIKPKIPLETIFMDSEPEGILITNERGHIIYANNAYNALTNAVWNKRTKSLESLLSRNQEASEALYRLINSLRLKSEG 98 (803)
Q Consensus 19 ~~~lr~~~~~~r~lld~~~d~i~v~D~~G~i~~~N~a~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 98 (803)
T Consensus 296 ~~~l~~SE~rfR~~~e~saiGmAlV~~dGr~l~VN~alc~mlGYs~~ELl~ltf~diThPdDl~~dl~~~~~Lla-Gei~ 374 (1116)
T PRK09776 296 RKHISESETRFRNAMEYSAIGMALVGTEGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLLS-GEIN 374 (1116)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHC-CCCC
T ss_conf 888776799999998746664699868981898169999884989999852989881696217778999999976-9966
Q ss_pred CEEEEEEECCEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 20389860100004898679999999999823788069999999783388999999999999999998525961999929
Q gi|254780450|r 99 SEEFRLMQSLNNYSQNSEPHWYRLKARVLPISLHKEKLLYAWRITDITSERKDQEKFFRELQNAIDYLDHSPVGFMSADH 178 (803)
Q Consensus 99 ~~e~~~~~~~~~~~~~g~~~w~~i~~~~~~~~~~~~~~~~~~~i~DIT~~k~~ee~l~~~~~~~~~~le~a~~gi~~~D~ 178 (803)
T Consensus 375 ~--y~l--EKRyirkDG~~vW~~ltvSlvRd~-~G~p~~fI~~v~DIterK~aE~~lr~l~erl~la~ea~~iGiwe~d~ 449 (1116)
T PRK09776 375 S--YSM--EKRYYNRDGDVVWALLAVSLVRDT-DGTPLYFIAQIEDINELKRTEQVNERLMERITLANEAGGIGIWEWDL 449 (1116)
T ss_pred C--CCC--EEEEECCCCCEEEEEEEEEEEECC-CCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 4--541--124673699799999899999769-99844899999733377999999999999999998624766355205
Q ss_pred CCCEEEEHHHHHHHCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCC-CEEEEEEEEEEEECCEEEEEEEEEEEEE
Q ss_conf 996897646798642999678045632188808820489999998620026-7148889999804897999999556765
Q gi|254780450|r 179 QGKILYINATLAEWIGIDLTTFTSKSISIGDITAGEGLALIQAIRTEPSHQ-KITTLDLDLRRIDNGHGIPVKIVHHILA 257 (803)
Q Consensus 179 ~g~i~~~N~~~~~llG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~g~~~~v~~~~~~~~ 257 (803)
T Consensus 450 ~~~~i~~~~r~~~l~g~~~~~-~~~~~~w~~~ihPdD~~~v~~~~~~~l~~~~~~d~E~Rl~~~-dG~~r~i~~~a~~~~ 527 (1116)
T PRK09776 450 KPNIISWDKRMFELYEIPPHI-KPNWQVWYACLHPEDRQRVEKEIRDALQGRSPFKLEFRIVVP-DGEIRHIRALANRVL 527 (1116)
T ss_pred CCCCEECCHHHHHHHCCCCCC-CCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECC-CCCEEEEEEEEEEEE
T ss_conf 665021137899984888222-668899987239156899999999997158875604678847-997899986214898
Q ss_pred CCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEEEEECCCCCCCCCCCCHHHHCCCCHHHH
Q ss_conf 38885547999998607899999999999999999983467509998502069983155444445488466179866661
Q gi|254780450|r 258 SCDGKPGESRTVVVSRKNCDSGDPSGTIANMRFNRFFNNIPMAIASIDKKGRILRTNAHFLKLFPNCTEGDGTSNDIFSI 337 (803)
Q Consensus 258 ~~~G~~~~~~~~~~Dit~~k~~e~~l~~se~rl~~i~e~~p~~I~~~d~~g~i~~~N~a~~~l~~g~~~~~~~g~~~~~~ 337 (803)
T Consensus 528 d~~G~~~r~~G~~~DITe~K~~eeaL~e~~erl~~~l~si~d~vi~tD~~~ri~~~Npaae~~t-G~~~~e~~G~~~~~v 606 (1116)
T PRK09776 528 NKDGEVERLLGINMDMTEVRQLNEALFEEKERLHITLDSIGEAVVCTDAAMKVTFMNPVAEKMT-GWTQEEALGVPLLTV 606 (1116)
T ss_pred CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECHHHHHHH-CCCHHHHCCCCHHHH
T ss_conf 6899889887313232077899999999999999998340224899737886788869999982-988799849987897
Q ss_pred C---CCCCCCCHHHHHHHHHHHCCC-CCCCCEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCHHH
Q ss_conf 0---111122024666655541123-345404887388506899998730456677613899999850232112210123
Q gi|254780450|r 338 V---HKNEKRKIIAALYDANDQKSD-ISPIDSPHPQDENRYFRFYISATLDRSTEAPEEQAILYTVEITEQKALEARMAQ 413 (803)
Q Consensus 338 ~---~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~i~~~~DITerk~~E~~L~q 413 (803)
T Consensus 607 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~G~~~~v~~s~~pi~~~~g~~~g~V~v~~Dit~~k~~~~~l~~ 686 (1116)
T PRK09776 607 LHITFGDNGPLMENPVEICLADTSRSYLEQDVVLHSRSGGSYDVQYSIAPLSTLDGENIGSVLVFQDVTESRAMLRQLSY 686 (1116)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHH
T ss_conf 00366442111121999997407873312353688269968999973045134778554479852012299999999987