HHsearch alignment for GI: 254780450 and conserved domain: PRK09776
>PRK09776 putative sensor protein; Provisional.
Probab=100.00 E-value=1.2e-33 Score=255.01 Aligned_cols=266 Identities=12% Similarity=0.124 Sum_probs=231.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEHHHHHHHCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHH
Q ss_conf 38899999999999999999852596199992999689764679864299967804563218880882048999999862
Q gi|254780450|r 146 TSERKDQEKFFRELQNAIDYLDHSPVGFMSADHQGKILYINATLAEWIGIDLTTFTSKSISIGDITAGEGLALIQAIRTE 225 (803)
Q Consensus 146 T~~k~~ee~l~~~~~~~~~~le~a~~gi~~~D~~g~i~~~N~~~~~llG~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (803)
T Consensus 290 ~~~r~~~~~l~~SE~rfR~~~e~saiGmAlV~~dGr~l~VN~alc~mlGYs~~ELl--~ltf~diThPdDl~~dl~~~~~ 367 (1116)
T PRK09776 290 YAFRAERKHISESETRFRNAMEYSAIGMALVGTEGQWLQVNKALCQFLGYSQEELR--GLTFQQLTWPEDLNKDLQQVEK 367 (1116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCHHHHH--HCCHHHHCCCCCHHHHHHHHHH
T ss_conf 99998888877679999999874666469986898189816999988498999985--2989881696217778999999
Q ss_pred HCCCCEE--EEEEEEEEEECCEEEEEEEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 0026714--88899998048979999995567653888554799999860789999999999999999998346750999
Q gi|254780450|r 226 PSHQKIT--TLDLDLRRIDNGHGIPVKIVHHILASCDGKPGESRTVVVSRKNCDSGDPSGTIANMRFNRFFNNIPMAIAS 303 (803)
Q Consensus 226 ~~~~~~~--~~e~~~~~~~~g~~~~v~~~~~~~~~~~G~~~~~~~~~~Dit~~k~~e~~l~~se~rl~~i~e~~p~~I~~ 303 (803)
T Consensus 368 LlaGei~~y~lEKRyirk-DG~~vW~~ltvSlvRd~~G~p~~fI~~v~DIterK~aE~~lr~l~erl~la~ea~~iGiwe 446 (1116)
T PRK09776 368 LLSGEINSYSMEKRYYNR-DGDVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLMERITLANEAGGIGIWE 446 (1116)
T ss_pred HHCCCCCCCCCEEEEECC-CCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 976996645411246736-9979999989999976999844899999733377999999999999999998624766355
Q ss_pred EEECEEEEEECCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEEE
Q ss_conf 85020699831554444454884661798666610111122024666655541123345404887388506899998730
Q gi|254780450|r 304 IDKKGRILRTNAHFLKLFPNCTEGDGTSNDIFSIVHKNEKRKIIAALYDANDQKSDISPIDSPHPQDENRYFRFYISATL 383 (803)
Q Consensus 304 ~d~~g~i~~~N~a~~~l~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~r~~~~~~~~~~ 383 (803)
T Consensus 447 ~d~~~~~i~~~~r~~~l~g~~~~~~~~~~~w~~~ihPdD~~~v~~~~~~~l~~~~-~~d~E~Rl~~~dG~~r~i~~~a~~ 525 (1116)
T PRK09776 447 WDLKPNIISWDKRMFELYEIPPHIKPNWQVWYACLHPEDRQRVEKEIRDALQGRS-PFKLEFRIVVPDGEIRHIRALANR 525 (1116)
T ss_pred EECCCCCEECCHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCC-CCCCEEEEECCCCCEEEEEEEEEE
T ss_conf 2056650211378999848882226688999872391568999999999971588-756046788479978999862148
Q ss_pred CCCCCCCCEEEEEEEEECCCCCCCCCCHHHHH
Q ss_conf 45667761389999985023211221012344
Q gi|254780450|r 384 DRSTEAPEEQAILYTVEITEQKALEARMAQTQ 415 (803)
Q Consensus 384 ~~~~~~~~~~~i~~~~DITerk~~E~~L~qa~ 415 (803)
T Consensus 526 ~~d~~G~~~r~~G~~~DITe~K~~eeaL~e~~ 557 (1116)
T PRK09776 526 VLNKDGEVERLLGINMDMTEVRQLNEALFEEK 557 (1116)
T ss_pred EECCCCCEEEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 98689988988731323207789999999999