HHsearch alignment for GI: 254780450 and conserved domain: PRK10161

>PRK10161 transcriptional regulator PhoB; Provisional.
Probab=99.89  E-value=5.6e-22  Score=172.85  Aligned_cols=118  Identities=20%  Similarity=0.361  Sum_probs=105.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCCE
Q ss_conf             756999769889999999999988989999899899989998659995489985878898889999999986--899829
Q gi|254780450|r  681 SAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKT--YPSLKF  758 (803)
Q Consensus       681 ~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~--~~~~~i  758 (803)
T Consensus         2 ~~kILiVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~l~~~--~~DliilDi~lP~~dG~~~~~~ir~~~~~~~~PI   79 (229)
T PRK10161          2 ARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEP--WPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPV   79 (229)
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC--CCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCE
T ss_conf             97199995999999999999997799999989999999998528--9989999789988763358788775024689758


Q ss_pred             EEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf             999067858998767605798075079799999999999851
Q gi|254780450|r  759 IFISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQ  800 (803)
Q Consensus       759 i~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~  800 (803)
T Consensus        80 I~lta~~~~~d~v~gl~~GADDYl~KPf~~~EL~aRi~a~lr  121 (229)
T PRK10161         80 VMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR  121 (229)
T ss_pred             EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             999556665779999876987652089998999999999971