HHsearch alignment for GI: 254780450 and conserved domain: PRK10360

>PRK10360 DNA-binding transcriptional activator UhpA; Provisional.
Probab=99.71  E-value=8.6e-16  Score=129.24  Aligned_cols=115  Identities=29%  Similarity=0.365  Sum_probs=102.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHH-CCCEEE-EECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             699976988999999999998-898999-989989998999865999548998587889888999999998689982999
Q gi|254780450|r  683 IVLLVEDEDSVRRGSKRMLET-RGYTVH-EAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIF  760 (803)
Q Consensus       683 ~iLvvdD~~~~~~~~~~~L~~-~g~~v~-~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~  760 (803)
T Consensus         3 ~I~IvDDh~l~r~gl~~~l~~~~~~~vv~~~~~~~~~l~~~~~~--~~dvvllD~~mp~~~g~~~~~~l~---~~~~viv   77 (196)
T PRK10360          3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGR--GVQVCICDISMPDISGLELLSQLP---KGMATIM   77 (196)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHC--CCCEEEECCCCCCCCCHHHHHHHH---CCCCEEE
T ss_conf             99998797999999999981299959999989999999988744--999999878878862077999984---3874899


Q ss_pred             EECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
Q ss_conf             906785899876760579807507979999999999985137
Q gi|254780450|r  761 ISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQSD  802 (803)
Q Consensus       761 ~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~~  802 (803)
T Consensus        78 ls~~~~~~~~~~a~~~Ga~g~l~K~~~~~el~~aI~~v~~G~  119 (196)
T PRK10360         78 LSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGG  119 (196)
T ss_pred             EEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
T ss_conf             973075999999997599889977899999999999998699