HHsearch alignment for GI: 254780450 and conserved domain: PRK10365
>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=99.92 E-value=1.2e-23 Score=184.63 Aligned_cols=119 Identities=27% Similarity=0.443 Sum_probs=108.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf 87569997698899999999999889899998998999899986599954899858788988899999999868998299
Q gi|254780450|r 680 NSAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFI 759 (803)
Q Consensus 680 ~~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii 759 (803)
T Consensus 4 ~~~~ILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~~~al~~l~~~--~~DlvllD~~mp~~~Gl~lL~~l~~~~p~~pvI 81 (441)
T PRK10365 4 DNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGIATLKEIKALNPAIPVL 81 (441)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC--CCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEE
T ss_conf 998599983989999999999997799899989999999998648--999999889999998999999998429898289
Q ss_pred EEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf 99067858998767605798075079799999999999851
Q gi|254780450|r 760 FISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQ 800 (803)
Q Consensus 760 ~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~ 800 (803)
T Consensus 82 viT~~~~~~~av~A~k~GA~Dyl~KP~~~~~L~~~i~~al~ 122 (441)
T PRK10365 82 IMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALA 122 (441)
T ss_pred EEECCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 99699998999999982851234078889999999999999