HHsearch alignment for GI: 254780450 and conserved domain: PRK10430

>PRK10430 DNA-binding transcriptional activator DcuR; Provisional.
Probab=99.88  E-value=3e-21  Score=167.67  Aligned_cols=118  Identities=23%  Similarity=0.309  Sum_probs=105.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHH-CCCEEE-EECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             699976988999999999998-898999-989989998999865999548998587889888999999998689982999
Q gi|254780450|r  683 IVLLVEDEDSVRRGSKRMLET-RGYTVH-EAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIF  760 (803)
Q Consensus       683 ~iLvvdD~~~~~~~~~~~L~~-~g~~v~-~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~  760 (803)
T Consensus         3 rVLIVEDD~~v~~~~~~~l~~~~gf~vv~~a~t~~eA~~~l~~~~~~~DLILLDi~mPd~~Glell~~lR~~~~~~~VI~   82 (239)
T PRK10430          3 NVLIVDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQQENGLDLLPVLHEAGCKSDVIV   82 (239)
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf             79999298999999999985189908999989999999999657999858997899999978999999998589981999


Q ss_pred             EECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf             9067858998767605798075079799999999999851
Q gi|254780450|r  761 ISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQ  800 (803)
Q Consensus       761 ~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~  800 (803)
T Consensus        83 ITa~~d~~~v~~Al~~Ga~DYLiKPf~~~rl~~~L~~y~~  122 (239)
T PRK10430         83 ISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGWRQ  122 (239)
T ss_pred             EEECCCHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHH
T ss_conf             9726889999999983950304899999999999999999