HHsearch alignment for GI: 254780450 and conserved domain: PRK10693
>PRK10693 response regulator of RpoS; Provisional.
Probab=99.93 E-value=1.9e-24 Score=190.25 Aligned_cols=118 Identities=27% Similarity=0.332 Sum_probs=106.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf 87569997698899999999999889899998998999899986599954899858788988899999999868998299
Q gi|254780450|r 680 NSAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFI 759 (803)
Q Consensus 680 ~~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii 759 (803)
T Consensus 6 ~gkkILIVDDd~~~r~~l~~~L~~~G~~V~~A~nG~eAl~~l~~~--~pDLIi~Dl~MP~mdGlell~~lr~~~~~~PVI 83 (337)
T PRK10693 6 VGKQILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDALELLGGF--TPDLMICDIAMPRMNGLKFVEHLRNRGDQTPVL 83 (337)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC--CCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 899899994999999999999997899999989999999998658--999999968999999899999999858996499
Q ss_pred EEECCCHHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHHHH
Q ss_conf 990678589987676057980750797-9999999999985
Q gi|254780450|r 760 FISGYAEDAFSKNLPKDAKFSFLSKPF-SLKQLATSVHELL 799 (803)
Q Consensus 760 ~~t~~~~~~~~~~~~~~~~~~~l~KP~-~~~~L~~~i~~~L 799 (803)
T Consensus 84 vlTa~~~~~d~v~al~~GA~DyL~KPI~d~~~Lr~~v~a~l 124 (337)
T PRK10693 84 VISATENMADIAKALRLGVEDVLLKPVKDLNRLREAVFACL 124 (337)
T ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf 99868999999999974995899789699999999999875