HHsearch alignment for GI: 254780450 and conserved domain: PRK11073

>PRK11073 glnL nitrogen regulation protein NR(II); Provisional.
Probab=100.00  E-value=0  Score=418.41  Aligned_cols=339  Identities=23%  Similarity=0.273  Sum_probs=259.1

Q ss_pred             HHHHHHCCCCEEEEEEECEEEEEECCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf             99998346750999850206998315544444548846617986666101111220246666555411233454048873
Q gi|254780450|r  290 FNRFFNNIPMAIASIDKKGRILRTNAHFLKLFPNCTEGDGTSNDIFSIVHKNEKRKIIAALYDANDQKSDISPIDSPHPQ  369 (803)
Q Consensus       290 l~~i~e~~p~~I~~~d~~g~i~~~N~a~~~l~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  369 (803)
T Consensus         9 ~~~Il~~~~d~Iiv~D~~g~I~~~N~aa~~l~-g~~~~~~~G~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-   84 (348)
T PRK11073          9 AGQILNSLINSILLLDDNLAIHYANPAAQQLL-AQSSRKLFGTPLPELLSYFSLN--IELMQESLQAGQGFTDNEVTLV-   84 (348)
T ss_pred             HHHHHHHHHHHHEEECCCCCEEEECHHHHHHH-CCCHHHHCCCCHHHHHCCCCCC--HHHHHHHHHCCCCCCCCEEEEE-
T ss_conf             99999866079649989797012839999997-8598998599689984665301--8999999973897413239999-


Q ss_pred             CCCEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             88506899998730456677613899999850232112210123444444687630342566415899999999998507
Q gi|254780450|r  370 DENRYFRFYISATLDRSTEAPEEQAILYTVEITEQKALEARMAQTQKLNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQS  449 (803)
Q Consensus       370 ~~~r~~~~~~~~~~~~~~~~~~~~~i~~~~DITerk~~E~~L~qa~~~~a~~~~~a~isHelr~pL~~I~g~~~ll~~~~  449 (803)
T Consensus        85 ~~~~~~~~~~~~~~~~~-----~~~l~~~~di~~~k~l~~e~~~~~~~~~~~e~~~~iaHelrnPL~~I~g~~~ll~~~~  159 (348)
T PRK11073         85 IDGRSHILSLTAQRLPE-----GMILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKAL  159 (348)
T ss_pred             ECCEEEEEEEEEEECCC-----CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf             89969999999998258-----6899999962799999999999999999999998401874785799999999997417


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEC
Q ss_conf             99847888899999998888764300454212005843585346789999999987503568169998148972269987
Q gi|254780450|r  450 RSSDASFADLMEIKHNANRAAILVRQLLAFSRKQTMRLTVLNLTEVIGNLRMMIQKLISEPPQVKLTVDYERDLWGVKTD  529 (803)
Q Consensus       450 ~~~~~~~~~l~~i~~~~~r~~~li~~lLd~sr~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~D  529 (803)
T Consensus       160 -~d~~~~e~~~~i~~~~~rl~~li~~ll~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~--~i~i~~~~~~~~~~i~~d  234 (348)
T PRK11073        160 -PDPALTEYTKVIIEQADRLRNLVDRLLGPQRPGTHI--TESIHKVAERVVQLVSLELPD--NVRLIRDYDPSLPELAHD  234 (348)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCHHHHHHHHHHHHHHHCCC--CCEEEEEECCCCCEEEEC
T ss_conf             -998999999999999999999999986441268877--547999999999999985657--809999607888726446


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCC
Q ss_conf             16999999998742276520678857999998504210122455667889789999997886688445420232222101
Q gi|254780450|r  530 LSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEIHTFNYSDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFFTTK  609 (803)
Q Consensus       530 ~~~l~qvl~NLl~NA~~A~~~~~~G~v~i~~~~~~~~~~~~~~~~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~ttk  609 (803)
T Consensus       235 ~~~l~qVl~NLl~NAik~~-~~~~g~i~i~~~~~~~~~-----i~~~~~~~~~~i~V~D~G~GI~~e~~~~iF~pf~ttk  308 (348)
T PRK11073        235 PDQIEQVLLNIVRNALQAL-GPEGGEITLRTRTAFQLT-----LHGERYRLAARIDIEDNGPGIPPHLQDTLFYPMVSGR  308 (348)
T ss_pred             HHHHHHHHHHHHHHHHHHH-CCCCCEEEEEEEECCCCC-----CCCCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCCC
T ss_conf             8788999999999999983-669977999996433322-----1453233048999999088789899997377836799


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf             357765303889999985167549999618894299999437
Q gi|254780450|r  610 KVGEGTGLGLSVVYGIIRQSGGYILPESEVGKGTIFRIFLPR  651 (803)
Q Consensus       610 ~~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~F~i~lP~  651 (803)
T Consensus       309 ~--~GtGLGL~ivk~ive~hgG~I~v~S~~g~-t~F~i~lPl  347 (348)
T PRK11073        309 E--GGTGLGLSIARNLIDQHSGKIEFTSWPGH-TEFSVYLPI  347 (348)
T ss_pred             C--CCCCHHHHHHHHHHHHCCCEEEEEEECCE-EEEEEEEEE
T ss_conf             8--98177899999999986998999982891-999999963