HHsearch alignment for GI: 254780450 and conserved domain: PRK11107
>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=98.87 E-value=1.3e-07 Score=71.50 Aligned_cols=112 Identities=16% Similarity=0.122 Sum_probs=84.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH-CCC-CC
Q ss_conf 8756999769889999999999988989999899899989998659995489985878898889999999986-899-82
Q gi|254780450|r 680 NSAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKT-YPS-LK 757 (803)
Q Consensus 680 ~~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~-~~~-~~ 757 (803)
T Consensus 535 ~g~~vlvve~~~~~~~~l~~~L~~~g~~v~~~~~~~~l----~--~~~~D~~li~~~~~~~~~~~~~~~~l~~~~~~~~~ 608 (920)
T PRK11107 535 AGKRLLYVEPNSLAAQATLDLLSETPLEVTYSPTLSQL----P--EAHYDYLLLGCPVTFREPLTMLHERLAKAKSMTDF 608 (920)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCCHHHH----H--CCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 58769997697789999999999749645751788775----1--36888799616666654066789998630035784
Q ss_pred EEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
Q ss_conf 9999067858998767605798075079799999999999
Q gi|254780450|r 758 FIFISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHE 797 (803)
Q Consensus 758 ii~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~ 797 (803)
T Consensus 609 ~il~~~s~~~~~~~~~~~~~~~~~L~kPv~~~~L~~~L~~ 648 (920)
T PRK11107 609 LILALPCHEQVNAEQLKQPGADACLSKPLSETRLLPALLT 648 (920)
T ss_pred EEEEECCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHC
T ss_conf 6997156434557887642530211277768899998722