HHsearch alignment for GI: 254780450 and conserved domain: PRK11173

>PRK11173 two-component response regulator; Provisional.
Probab=99.87  E-value=5e-21  Score=166.15  Aligned_cols=116  Identities=28%  Similarity=0.486  Sum_probs=102.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             56999769889999999999988989999899899989998659995489985878898889999999986899829999
Q gi|254780450|r  682 AIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIFI  761 (803)
Q Consensus       682 ~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~~  761 (803)
T Consensus         4 ~~ILiVEDD~~~~~~l~~~L~~~G~~V~~a~~~~ea~~~l~~~--~~DlvilDi~lp~~~G~~l~~~iR~~-~~~piI~l   80 (237)
T PRK11173          4 PHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEN--DINLVIMDINLPGKNGLLLARELREQ-ANVALMFL   80 (237)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC--CCCEEEEECCCCCCCCHHHHHHHHHC-CCCCEEEE
T ss_conf             9899995989999999999998899999989999999998638--99899993899988730355566516-88478999


Q ss_pred             ECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf             067858998767605798075079799999999999851
Q gi|254780450|r  762 SGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQ  800 (803)
Q Consensus       762 t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~  800 (803)
T Consensus        81 ta~~~~~~~i~~l~~GaddYi~KPf~~~EL~arv~~~l~  119 (237)
T PRK11173         81 TGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLS  119 (237)
T ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf             432577889999976976788789887999999999986