HHsearch alignment for GI: 254780450 and conserved domain: PRK11360
>PRK11360 sensory histidine kinase AtoS; Provisional.
Probab=99.18 E-value=6.9e-09 Score=80.58 Aligned_cols=128 Identities=9% Similarity=0.077 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCEEEEHHHHHHHCCCCHHHHCCCCCCHHHHCCCHHHH-HHHHHHHHHCCCCEEE
Q ss_conf 999999999998525961999929996897646798642999678045632188808820489-9999986200267148
Q gi|254780450|r 155 FFRELQNAIDYLDHSPVGFMSADHQGKILYINATLAEWIGIDLTTFTSKSISIGDITAGEGLA-LIQAIRTEPSHQKITT 233 (803)
Q Consensus 155 l~~~~~~~~~~le~a~~gi~~~D~~g~i~~~N~~~~~llG~~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (803)
T Consensus 256 L~~~~~~~e~IL~sm~dGVIaiD~~G~I~~~N~~A~~llg~~~~e~ig~~--~~~l~~~~~~~~~~~~~l~~~~--~~~~ 331 (607)
T PRK11360 256 LREARTLNELIIENAADGIIAIDRQGDITTMNPAAEVITGYQRHELVGQP--YSMLFDNTQFYSPVLDTLEHGT--EHVA 331 (607)
T ss_pred HHHHHHHHHHHHHHHCCEEEEECCCCCEEEECHHHHHHHCCCHHHHCCCC--HHHHCCCHHHHHHHHHHHHCCC--CCCC
T ss_conf 99999989999861046699997999499983899998587978985967--9995795767799999985377--4212
Q ss_pred EEEEEEEEECCEEEEEEEEEEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 8899998048979999995567653888554799999860789999999999999
Q gi|254780450|r 234 LDLDLRRIDNGHGIPVKIVHHILASCDGKPGESRTVVVSRKNCDSGDPSGTIANM 288 (803)
Q Consensus 234 ~e~~~~~~~~g~~~~v~~~~~~~~~~~G~~~~~~~~~~Dit~~k~~e~~l~~se~ 288 (803)
T Consensus 332 ~~~~~~~--~~~~~~l~~~~s~~~~~~g~~~G~v~~~~DiTe~~~le~~l~~~er 384 (607)
T PRK11360 332 LEISFPG--RDRTIELSVTTSRLHDTHGEMIGAVVIFSDLTARKRLQRRMARAER 384 (607)
T ss_pred EEEEECC--CCCEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 4899605--8834999999853576898588999999957789999999999999