HHsearch alignment for GI: 254780450 and conserved domain: PRK11466
>PRK11466 hybrid sensory histidine kinase TorS; Provisional.
Probab=100.00 E-value=0 Score=660.19 Aligned_cols=355 Identities=24% Similarity=0.351 Sum_probs=304.6
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CE----EE
Q ss_conf 4444687630342566415899999999998507998478888999999988887643004542120058--43----58
Q gi|254780450|r 416 KLNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQSRSSDASFADLMEIKHNANRAAILVRQLLAFSRKQTM--RL----TV 489 (803)
Q Consensus 416 ~~~a~~~~~a~isHelr~pL~~I~g~~~ll~~~~~~~~~~~~~l~~i~~~~~r~~~li~~lLd~sr~~~~--~~----~~ 489 (803)
T Consensus 440 AnrAKS~FLA~MSHEIRTPLNgIlG~~eLL~-~~~l~~~qr~~l~~I~~s~~~LL~lInDILD~SkiEaG~~~l~l~~~p 518 (912)
T PRK11466 440 ASQAKSAFLAAMSHEIRTPLYGILGTAQLLA-DNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEP 518 (912)
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 9999999998713976775999999999984-799998999999999999999999999999999981899813886115
Q ss_pred EEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE-EEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
Q ss_conf 53467899999999875035681699981489722-69987169999999987422765206788579999985042101
Q gi|254780450|r 490 LNLTEVIGNLRMMIQKLISEPPQVKLTVDYERDLW-GVKTDLSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEI 568 (803)
Q Consensus 490 ~~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~v~~D~~~l~qvl~NLl~NA~~A~~~~~~G~v~i~~~~~~~~~~ 568 (803)
T Consensus 519 f~l~~ll~~v~~~~~~~a-~~k~l~l~~~~~~~lp~~v~gD~~RLrQIL~NLlsN---AiKFT~~G~V~l~~~~------ 588 (912)
T PRK11466 519 FEPRPLLESTLQLMSGRV-KGRPIRLATDIADDVPSALMGDPRRIRQVITNLLSN---ALRFTDEGSIVLRSRT------ 588 (912)
T ss_pred CCHHHHHHHHHHHHHHHH-HHCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHH---HCCCCCCCEEEEEEEE------
T ss_conf 689999999999999999-837978999727999860863588999999999998---7061899679999998------
Q ss_pred CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEE
Q ss_conf 22455667889789999997886688445420232222101357765303889999985167549999618894299999
Q gi|254780450|r 569 HTFNYSDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFFTTKKVGEGTGLGLSVVYGIIRQSGGYILPESEVGKGTIFRIF 648 (803)
Q Consensus 569 ~~~~~~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~ttk~~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~F~i~ 648 (803)
T Consensus 589 ---------~~~~l~~~V~DTGiGI~~e~~~~IF~~F~Q~~~~~gGtGLGLaI~k~LvelMGG~I~V~S~~G~GS~F~~~ 659 (912)
T PRK11466 589 ---------DGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLR 659 (912)
T ss_pred ---------CCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEE
T ss_conf ---------69789999850899999999998844761588998992668999999999879979997169987289999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCC
Q ss_conf 43757664433333322223544445333478756999769889999999999988989999899899989998659995
Q gi|254780450|r 649 LPRYVQEHTQESHYSHDIAIIPQEEPADLTGNSAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRV 728 (803)
Q Consensus 649 lP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~ 728 (803)
T Consensus 660 LPl~~~~~~~~~~---------~~~~~~--~~~lrVLvVEDn~~N~~v~~~~L~~lG~~v~~A~nG~eAle~l~~~-~~f 727 (912)
T PRK11466 660 LPLRHATAPVPKT---------VNQAVR--LDGLRLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNS-EPF 727 (912)
T ss_pred EECCCCCCCCCCC---------CCCCCC--CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC-CCC
T ss_conf 9777888787643---------346657--7888699994878899999999998699899989999999999718-998
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
Q ss_conf 48998587889888999999998689982999906785899876760579807507979999999999985137
Q gi|254780450|r 729 DIVISDVVMPEMDGPTLLRELRKTYPSLKFIFISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQSD 802 (803)
Q Consensus 729 dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~~ 802 (803)
T Consensus 728 DlVLmDi~MP~mDG~eatr~iR~~~~~~pIIAlTA~a~~ed~~~~l~aGmd~~L~KPv~~~~L~~~l~~~l~~~ 801 (912)
T PRK11466 728 AAALVDFDLPDYDGITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQLQ 801 (912)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCC
T ss_conf 58987699999989999999986199997899779878899999997699877549899999999999984667