HHsearch alignment for GI: 254780450 and conserved domain: PRK13435
>PRK13435 response regulator; Provisional.
Probab=99.88 E-value=3.9e-21 Score=166.88 Aligned_cols=114 Identities=24% Similarity=0.350 Sum_probs=99.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHHCCCCCCEEEEECCCC-CCCHHHHHHHHHHHCCCCCEE
Q ss_conf 5699976988999999999998898999-98998999899986599954899858788-988899999999868998299
Q gi|254780450|r 682 AIVLLVEDEDSVRRGSKRMLETRGYTVH-EAFSGTDALKVMEKLQGRVDIVISDVVMP-EMDGPTLLRELRKTYPSLKFI 759 (803)
Q Consensus 682 ~~iLvvdD~~~~~~~~~~~L~~~g~~v~-~a~~g~eal~~~~~~~~~~dlil~D~~mp-~m~G~~~~~~ir~~~~~~~ii 759 (803)
T Consensus 2 mRILIVEDe~~i~~~l~~~L~~~G~~vv~~A~~~~eAl~~~~~~--~PDlvllDi~LpdG~~G~e~~r~l~~~-~~ipvI 78 (141)
T PRK13435 2 LRVLIVEDEALIALELEKLLEEAGHQVVGIASTSEQALALGRRA--QPDVALVDIRLADGPTGVEVARRLSID-GGVEVI 78 (141)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC--CCCEEEECCCCCCCCCHHHHHHHHHHC-CCCCEE
T ss_conf 78999899899999999999987997999759999999997659--998999788789999899999999875-998389
Q ss_pred EEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf 990678589987676057980750797999999999998513
Q gi|254780450|r 760 FISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQS 801 (803)
Q Consensus 760 ~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~ 801 (803)
T Consensus 79 ~lTa~~d~~--~~~~-aGA~dyl~KPf~~~eL~~ai~~~~~r 117 (141)
T PRK13435 79 FMTANPERV--GHDF-AGALGVIAKPYSLRQVARALSYVAAR 117 (141)
T ss_pred EEECCHHHH--HHHH-CCCCCEEECCCCHHHHHHHHHHHHHH
T ss_conf 997779986--0134-59985898999989999999999971