HHsearch alignment for GI: 254780450 and conserved domain: PRK13837

>PRK13837 two-component VirA-like sensor kinase; Provisional.
Probab=100.00  E-value=0  Score=685.55  Aligned_cols=387  Identities=32%  Similarity=0.484  Sum_probs=343.9

Q ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             85023211221012344444468763034256641589999999999850799847888899999998888764300454
Q gi|254780450|r  399 VEITEQKALEARMAQTQKLNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQSRSSDASFADLMEIKHNANRAAILVRQLLA  478 (803)
Q Consensus       399 ~DITerk~~E~~L~qa~~~~a~~~~~a~isHelr~pL~~I~g~~~ll~~~~~~~~~~~~~l~~i~~~~~r~~~li~~lLd  478 (803)
T Consensus       432 r~etER~~LE~qL~qAQKmEAiG~LAgGIAHDFNNiLt~I~G~aeLa~~~l~~~~~~~~~L~~I~~aa~Ra~~Lv~qLL~  511 (831)
T PRK13837        432 RLETERDALERRLEHARRLEAVGTLASGIAHNFNNILGAILGYAEMALNKLRRHSRARRHIDEIISSGDRARLIIDQILT  511 (831)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             87999999999999999999999999899998700899999999998620699847789999999999999999999999


Q ss_pred             HHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             21200584358534678999999998750356816999814897226998716999999998742276520678857999
Q gi|254780450|r  479 FSRKQTMRLTVLNLTEVIGNLRMMIQKLISEPPQVKLTVDYERDLWGVKTDLSQFEQVLVNLCVNAHHAIMLKESGSLTV  558 (803)
Q Consensus       479 ~sr~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~D~~~l~qvl~NLl~NA~~A~~~~~~G~v~i  558 (803)
T Consensus       512 FSR~~~~~~~~vdl~~lv~e~~~llr~~l~~--~I~l~~~~~~~~~~V~aD~~QL~QVllNL~~NA~dAM--~~gG~l~I  587 (831)
T PRK13837        512 FGRKGERRTKPFSLSELVTEIAPLLRVSLPP--TVELDFDFDQEPAVVEGNPAQLQQVILNLCKNAAQAM--DENGRVDI  587 (831)
T ss_pred             HHCCCCCCCCEECHHHHHHHHHHHHHHHCCC--CEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHC--CCCCEEEE
T ss_conf             8589999771774999999999999987589--8699997189885388879999999999999999976--79986999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             99850421012245566788978999999788668844542023222210135776530388999998516754999961
Q gi|254780450|r  559 RTRNIPSTEIHTFNYSDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFFTTKKVGEGTGLGLSVVYGIIRQSGGYILPESE  638 (803)
Q Consensus       559 ~~~~~~~~~~~~~~~~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~ttk~~g~GtGLGL~i~~~iv~~~gG~i~v~S~  638 (803)
T Consensus       588 ~~~~~~~~~~~~~~~~~~~~G~yv~L~VsDtG~GI~~e~l~RIFEPFFTTK~--~GTGLGLAvV~gIV~~hgG~I~V~S~  665 (831)
T PRK13837        588 RLSRVDLRKPKVLAHGTAPPGRYVLLRVSDTGRGIDEAVLPHIFEPFFTTRA--RGTGLGLATVHGIVSAHAGYIDVQST  665 (831)
T ss_pred             EEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCC--CCCCCCHHHHHHHHHHCCCEEEEECC
T ss_conf             9855533632321157789989899999867999898999660489867889--98874699999999986986999726


Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHH
Q ss_conf             88942999994375766443333332222354444533347875699976988999999999998898999989989998
Q gi|254780450|r  639 VGKGTIFRIFLPRYVQEHTQESHYSHDIAIIPQEEPADLTGNSAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDAL  718 (803)
Q Consensus       639 ~g~Gt~F~i~lP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal  718 (803)
T Consensus       666 pG~GTtF~v~LP~~~~~~~~~-----~~~-~~~---~~~~g~ge~ILvVdDe~~vr~~~~~~L~~lGY~v~~a~~~~~Al  736 (831)
T PRK13837        666 VGRGTRFDVYLPPSSKVPVAP-----DAF-GPL---PAPRGNGETVLLVEPDDALLERYEEKLAALGYEPVGFSTLSAAI  736 (831)
T ss_pred             CCCCEEEEEEEECCCCCCCCC-----CCC-CCC---CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHH
T ss_conf             999718999831798877787-----767-777---88899997799985988999999999996799688868999999


Q ss_pred             HHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Q ss_conf             99986599954899858788988899999999868998299990678589987676057980750797999999999998
Q gi|254780450|r  719 KVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIFISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHEL  798 (803)
Q Consensus       719 ~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~  798 (803)
T Consensus       737 ~~~~~~~~~~DLvltD-~~p~~~g~~~~~~l~~~~p~lpVi-lsg~~~~~~~~~~~~~~~~~fL~KPfs~~~LA~avR~a  814 (831)
T PRK13837        737 AWISKDGKRFDLVLVD-QPSLGDSQLAIAALHAAAPTLPII-LAGSSLKMAAREALATAIAEILPKPISSRTLAYALRTA  814 (831)
T ss_pred             HHHHHCCCCCEEEEEC-CCCCCCHHHHHHHHHHHCCCCEEE-EECCCCHHHHHCHHHCCCCEEEECCCCHHHHHHHHHHH
T ss_conf             9998389985399988-999998799999998618997499-97688144331102226670650999999999999999


Q ss_pred             HCCC
Q ss_conf             5137
Q gi|254780450|r  799 LQSD  802 (803)
Q Consensus       799 L~~~  802 (803)
T Consensus       815 L~~~  818 (831)
T PRK13837        815 LATA  818 (831)
T ss_pred             HHCC
T ss_conf             8488