HHsearch alignment for GI: 254780450 and conserved domain: pfam00072

>pfam00072 Response_reg Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.
Probab=99.92  E-value=4e-24  Score=187.95  Aligned_cols=111  Identities=33%  Similarity=0.588  Sum_probs=104.1

Q ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             99976988999999999998898999989989998999865999548998587889888999999998689982999906
Q gi|254780450|r  684 VLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIFISG  763 (803)
Q Consensus       684 iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~~t~  763 (803)
T Consensus         1 ILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~~al~~~~~~--~~dlvi~Di~mP~~dG~el~~~ir~~~~~~piI~~T~   78 (111)
T pfam00072         1 VLIVDDDPLIRELLRQLLEKEGYVVAEADDGEEALELLKEK--RPDLILLDIRMPGMDGLELLRRIRRRPPTTPVIVLTA   78 (111)
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC--CCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             09998989999999999998899999989999999999847--9989999536899501579999973599980999975


Q ss_pred             CCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf             785899876760579807507979999999999
Q gi|254780450|r  764 YAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVH  796 (803)
Q Consensus       764 ~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~  796 (803)
T Consensus        79 ~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~ir  111 (111)
T pfam00072        79 HGDEEDAVEALKAGANDFLSKPFDPEELVAALR  111 (111)
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHCC
T ss_conf             089999999997798779949999899998529