RPSBLAST alignment for GI: 254780450 and conserved domain: COG3852

>gnl|CDD|33642 COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]. Length = 363
 Score =  107 bits (269), Expect = 1e-23
 Identities = 91/367 (24%), Positives = 154/367 (41%), Gaps = 36/367 (9%)

Query: 294 FNNIPMAIASIDKKGRILRTNAHFLKLFPNCTE--GDGTSNDI--FSIVHKNEKRKIIAA 349
            NN+   +  +D +  I   N    +L             +++  F  +  +   +++  
Sbjct: 13  LNNLINPVLLVDDELAIHYANPAAEQLLAVSARRLAGTRLSELLPFGSLLLSLLDQVLER 72

Query: 350 LYDANDQKSDISPIDSPHPQDENRYFRFYISATLDRSTEAPEEQAILYTV-EITEQKALE 408
                + +  +  +   H  D            L  +    E  ++L        Q+ L+
Sbjct: 73  GQPVTEYEVTLVILGRSHIVD------------LTVAPVPEEPGSVLLEFHPRDMQRRLD 120

Query: 409 ARMAQTQKLNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQSRSSDASFADLME-IKHNAN 467
               Q  +  AV  L  G+AH+  N L  I  ++   LL+    D +  +L + I   A+
Sbjct: 121 REQTQHAQQRAVKGLVRGLAHEIKNPLGGIRGAAQ--LLERALPDEALRELTQLIIEEAD 178

Query: 468 RAAILVRQLLAFS-RKQTMRLTVLNLTEVIGNLRMMIQKLISEPPQVKLTVDYERDLWGV 526
           R   LV +L     ++   R+ V N+ EV+  +R +++        V+L  DY+  L  V
Sbjct: 179 RLRNLVDRLEVLGPQRPGDRVPV-NIHEVLERVRALVE--AEFADNVRLIRDYDPSLPEV 235

Query: 527 KTDLSQFEQVLVNLCVNAHHAI--MLKESGSLTVRTRNIPSTEIH-TFNYSDLPTKDMVL 583
             D  Q  QV +NL  NA  A+     E G + +RTR      I  T     LP      
Sbjct: 236 LGDRDQLIQVFLNLVRNAAQALGGRADEGGEIILRTRTGIQLTIAGTRYRLALP------ 289

Query: 584 VEVEDTGIGMSPDIMEKIFEPFFTTKKVGEGTGLGLSVVYGIIRQSGGYILPESEVGKGT 643
           +EV D G G+ PD+ + +F P  + ++   GTGLGL++   +I Q GG I  +S  G+ T
Sbjct: 290 LEVIDNGPGVPPDLQDHLFYPMVSGRE--GGTGLGLALAQNLIDQHGGKIEFDSWPGR-T 346

Query: 644 IFRIFLP 650
           +FR+ LP
Sbjct: 347 VFRVLLP 353