HHsearch alignment for GI: 254780451 and conserved domain: PRK05478

>PRK05478 isopropylmalate isomerase large subunit; Validated.
Probab=100.00  E-value=0  Score=959.84  Aligned_cols=454  Identities=26%  Similarity=0.342  Sum_probs=379.3

Q ss_pred             CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCHH
Q ss_conf             66579999999861235545777663645325220000035799999999999997199999928789813998683211
Q gi|254780451|r   57 GCTVTKEQIHAFVKWLDNKGTVESEVSYRFSRVLMQDFTGVPAVVDLAAMRDAIVVLGGDPQNINPLVPVDLVIDHSLIV  136 (896)
Q Consensus        57 ~~~~~~~~~~~~~~w~~~~~~~~~ei~f~p~Rv~~qD~Tg~pa~vdlaamR~~~~~~g~dp~~inp~vp~dlviDHsv~v  136 (896)
T Consensus         2 ~~Tl~eKI~~~H~v~--~--~~~~~~~l~iD~~~~hd~t~p~a~~~l~~~----g~~v~~p~~------~~~~~DH~vpt   67 (466)
T PRK05478          2 AKTLYDKLWDAHVVH--E--LEDGTDLLYIDRHLVHEVTSPQAFEGLRLA----GRKVRRPDK------TFATMDHNVPT   67 (466)
T ss_pred             CCCHHHHHHHHHCCC--C--CCCCCEEEEEEHHHHHCCCHHHHHHHHHHC----CCCCCCCCC------EEEECCCCCCC
T ss_conf             855899999972265--5--689826999440566317689999999985----996368888------79963899988


Q ss_pred             HCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC---CCCHHHHHHHHHCCCEEEECCCCCEEEEEE-E
Q ss_conf             00599--88999899988754267899998774214880786088---762167789863351131036886179830-1
Q gi|254780451|r  137 DYSGN--KDAVTRNKDLEYQRNEERYRFLKWGQKSFKNFRVVPPG---TGICHQINLEYLGQSVWTKNENGENIAYPD-T  210 (896)
Q Consensus       137 d~~g~--~~a~~~n~~~e~~rN~Ery~Flkwa~~~f~~~~v~pPG---~GI~HQvnlE~la~vv~~~~~~~~~~a~Pd-t  210 (896)
T Consensus        68 ~~~~~~~~~~~~----------~~~~~~l~~~~~~~-gi~~~~~~~~~~GI~H~v~~E-------------~G~~~PG~~  123 (466)
T PRK05478         68 TDINRPIADPVA----------RIQVETLEKNCKEF-GITLFDLGDPRQGIVHVIGPE-------------QGLTLPGMT  123 (466)
T ss_pred             CCCCCCCCCHHH----------HHHHHHHHHHHHHH-CCCCCCCCCCCCCEEEEECCC-------------CCCCCCCCE
T ss_conf             774555689789----------99999999999982-971246899998757787421-------------273689877


Q ss_pred             EEECCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf             32068876444520123203434899999707751411672899999767786443688999999984102212127999
Q gi|254780451|r  211 CVGTDSHTTMINALGILGWGVGGIEAEAAMLGCPISMLLPEVVGFEVTGSLQEGVTATDLVLTITQMLRKEGVVSKFVEF  290 (896)
Q Consensus       211 lVGtDSHT~~~galG~la~GVGg~eaea~mlGqp~~~~vPevigv~L~G~L~~gVtakDiiL~i~~~Lr~~Gvvgk~vEf  290 (896)
T Consensus       124 ivg~DSHT~t~GalGala~GvG~te~~~vmat~~~~~~vPe~i~v~l~G~L~~gVtaKDliL~ii~~l~~~G~~gk~vEF  203 (466)
T PRK05478        124 IVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQTLLQKKAKTMKIEVDGKLPPGVTAKDIILAIIGKIGTAGGTGYVIEF  203 (466)
T ss_pred             EEEECCCCCCCCHHHHHEECCCHHHHHHHHCCCEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             99624576654777887046679999999807837885672899998178899987799999999985646778559999


Q ss_pred             EECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
Q ss_conf             61550017875632120001003720377519989999998639998899999987464102367676678863069999
Q gi|254780451|r  291 FGSGFESMVLADRATIANMAPEYGATCGFFPVDRGTIDYLRLSGRSNSRVDLVEAYTKVQGMWREDIDYEKVAFTKKMKL  370 (896)
Q Consensus       291 ~G~gi~~LS~~dRaTIaNMa~E~GAt~gifp~De~T~~YL~~tGR~~~~v~lve~Y~ka~~l~~~~~~d~~a~Y~~viei  370 (896)
T Consensus       204 ~G~gv~~Ls~~~R~TI~NMa~E~GA~~gifp~D~~T~~YL~--gR~--~~p~~~~~~~a~~~~~~l~~D~~a~Y~~~i~i  279 (466)
T PRK05478        204 AGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDETTFEYLK--GRP--FAPKGEDWDKAVAYWKTLKSDEDAVFDKVVTL  279 (466)
T ss_pred             ECCCCCCCCHHHHHHHHCCCHHHCCEEEEECCCHHHHHHHH--CCC--CCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEE
T ss_conf             46510214787865564033734867999657787999986--166--67308999999987641346888712169999


Q ss_pred             ECCCCCCHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
Q ss_conf             80314301226566564136777301166876640011002321024578888875554457531046765459998778
Q gi|254780451|r  371 DLGNVSPSVAGPRRPESRLSLSEVPSSFVTEMNEYYKKSHTLDEKYPVKGCDFHLKHGDVAIASITSCTNTFNPSVMIGA  450 (896)
Q Consensus       371 DLs~ieP~VAgP~~P~d~v~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~VvIAaIgSCTNtSnp~~miaA  450 (896)
T Consensus       280 Dls~leP~Va~p~~P~~~v~v~~~~p~~~~~~~~~~~~~~~~a~~ym~~~~g~~~~~~~Id~a~IGSCTNgr~~Dl~~AA  359 (466)
T PRK05478        280 DAADIAPQVTWGTNPGQVISIDGKVPDPEDEADPVKRASAERALAYMGLKPGQPITDIKIDKVFIGSCTNSRIEDLRAAA  359 (466)
T ss_pred             EHHHCCEEECCCCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf             84313011128988443407523478824303634556787765531667895114771017999216899806899999


Q ss_pred             HHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCEECCCCCCCCCC-CCCCCCCHHHHHCCCCCEEE
Q ss_conf             89998898649875867307970161899999998588577775053020553224212-77768830221011366358
Q gi|254780451|r  451 GLLARNAVRAGLKSKPWVKTSCAPGSQVSYEYLVQAGLVEYLEALGFSLVGFGCTTCIG-NSGALKKEISEVIHQKSLVV  529 (896)
Q Consensus       451 gllAkkAv~~Glkv~p~Vkt~l~PGS~~V~~~L~~~Gll~~L~~aGf~i~~~GCg~CiG-nsG~l~~~i~~~i~~~~l~~  529 (896)
T Consensus       360 ~il------kG~kv~~~Vr~~v~PgS~~V~~~~~~~Gl~~~l~~aG~~i~~~GC~~CiG~~~~~l~~--------ge---  422 (466)
T PRK05478        360 AVV------KGRKVAPGVRALVVPGSGLVKAQAEAEGLDKIFIEAGFEWREPGCSMCLAMNPDRLPP--------GE---  422 (466)
T ss_pred             HHH------CCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHCCCEECCCCCHHCCCCCCCCCCC--------CC---
T ss_conf             997------6986578832999789899999999867599999769688688353024869887999--------98---


Q ss_pred             EEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             7863367666654685433100059789999985161222310023
Q gi|254780451|r  530 AGVLSGNRNFEGRISPDVEANYLLSPPLVVAYALAGNVRKNLIKDP  575 (896)
Q Consensus       530 ~sV~SgNRNFeGR~~p~~~~~yLaSP~lVvA~AiaG~I~~d~~~dp  575 (896)
T Consensus       423 ~~vSt~NRNF~GR~g~~~~-~yLaSP~~vaAsAi~G~I-----tdp  462 (466)
T PRK05478        423 RCASTSNRNFEGRQGKGGR-THLVSPAMAAAAAITGHF-----VDV  462 (466)
T ss_pred             EEEEEECCCCCCCCCCCCC-EEECCHHHHHHHHHCCCC-----CCH
T ss_conf             8998748897888898988-787899999999966154-----885