HHsearch alignment for GI: 254780451 and conserved domain: PRK05478
>PRK05478 isopropylmalate isomerase large subunit; Validated.
Probab=100.00 E-value=0 Score=959.84 Aligned_cols=454 Identities=26% Similarity=0.342 Sum_probs=379.3
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCHH
Q ss_conf 66579999999861235545777663645325220000035799999999999997199999928789813998683211
Q gi|254780451|r 57 GCTVTKEQIHAFVKWLDNKGTVESEVSYRFSRVLMQDFTGVPAVVDLAAMRDAIVVLGGDPQNINPLVPVDLVIDHSLIV 136 (896)
Q Consensus 57 ~~~~~~~~~~~~~~w~~~~~~~~~ei~f~p~Rv~~qD~Tg~pa~vdlaamR~~~~~~g~dp~~inp~vp~dlviDHsv~v 136 (896)
T Consensus 2 ~~Tl~eKI~~~H~v~--~--~~~~~~~l~iD~~~~hd~t~p~a~~~l~~~----g~~v~~p~~------~~~~~DH~vpt 67 (466)
T PRK05478 2 AKTLYDKLWDAHVVH--E--LEDGTDLLYIDRHLVHEVTSPQAFEGLRLA----GRKVRRPDK------TFATMDHNVPT 67 (466)
T ss_pred CCCHHHHHHHHHCCC--C--CCCCCEEEEEEHHHHHCCCHHHHHHHHHHC----CCCCCCCCC------EEEECCCCCCC
T ss_conf 855899999972265--5--689826999440566317689999999985----996368888------79963899988
Q ss_pred HCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC---CCCHHHHHHHHHCCCEEEECCCCCEEEEEE-E
Q ss_conf 00599--88999899988754267899998774214880786088---762167789863351131036886179830-1
Q gi|254780451|r 137 DYSGN--KDAVTRNKDLEYQRNEERYRFLKWGQKSFKNFRVVPPG---TGICHQINLEYLGQSVWTKNENGENIAYPD-T 210 (896)
Q Consensus 137 d~~g~--~~a~~~n~~~e~~rN~Ery~Flkwa~~~f~~~~v~pPG---~GI~HQvnlE~la~vv~~~~~~~~~~a~Pd-t 210 (896)
T Consensus 68 ~~~~~~~~~~~~----------~~~~~~l~~~~~~~-gi~~~~~~~~~~GI~H~v~~E-------------~G~~~PG~~ 123 (466)
T PRK05478 68 TDINRPIADPVA----------RIQVETLEKNCKEF-GITLFDLGDPRQGIVHVIGPE-------------QGLTLPGMT 123 (466)
T ss_pred CCCCCCCCCHHH----------HHHHHHHHHHHHHH-CCCCCCCCCCCCCEEEEECCC-------------CCCCCCCCE
T ss_conf 774555689789----------99999999999982-971246899998757787421-------------273689877
Q ss_pred EEECCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 32068876444520123203434899999707751411672899999767786443688999999984102212127999
Q gi|254780451|r 211 CVGTDSHTTMINALGILGWGVGGIEAEAAMLGCPISMLLPEVVGFEVTGSLQEGVTATDLVLTITQMLRKEGVVSKFVEF 290 (896)
Q Consensus 211 lVGtDSHT~~~galG~la~GVGg~eaea~mlGqp~~~~vPevigv~L~G~L~~gVtakDiiL~i~~~Lr~~Gvvgk~vEf 290 (896)
T Consensus 124 ivg~DSHT~t~GalGala~GvG~te~~~vmat~~~~~~vPe~i~v~l~G~L~~gVtaKDliL~ii~~l~~~G~~gk~vEF 203 (466)
T PRK05478 124 IVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQTLLQKKAKTMKIEVDGKLPPGVTAKDIILAIIGKIGTAGGTGYVIEF 203 (466)
T ss_pred EEEECCCCCCCCHHHHHEECCCHHHHHHHHCCCEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 99624576654777887046679999999807837885672899998178899987799999999985646778559999
Q ss_pred EECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
Q ss_conf 61550017875632120001003720377519989999998639998899999987464102367676678863069999
Q gi|254780451|r 291 FGSGFESMVLADRATIANMAPEYGATCGFFPVDRGTIDYLRLSGRSNSRVDLVEAYTKVQGMWREDIDYEKVAFTKKMKL 370 (896)
Q Consensus 291 ~G~gi~~LS~~dRaTIaNMa~E~GAt~gifp~De~T~~YL~~tGR~~~~v~lve~Y~ka~~l~~~~~~d~~a~Y~~viei 370 (896)
T Consensus 204 ~G~gv~~Ls~~~R~TI~NMa~E~GA~~gifp~D~~T~~YL~--gR~--~~p~~~~~~~a~~~~~~l~~D~~a~Y~~~i~i 279 (466)
T PRK05478 204 AGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDETTFEYLK--GRP--FAPKGEDWDKAVAYWKTLKSDEDAVFDKVVTL 279 (466)
T ss_pred ECCCCCCCCHHHHHHHHCCCHHHCCEEEEECCCHHHHHHHH--CCC--CCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEE
T ss_conf 46510214787865564033734867999657787999986--166--67308999999987641346888712169999
Q ss_pred ECCCCCCHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
Q ss_conf 80314301226566564136777301166876640011002321024578888875554457531046765459998778
Q gi|254780451|r 371 DLGNVSPSVAGPRRPESRLSLSEVPSSFVTEMNEYYKKSHTLDEKYPVKGCDFHLKHGDVAIASITSCTNTFNPSVMIGA 450 (896)
Q Consensus 371 DLs~ieP~VAgP~~P~d~v~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~VvIAaIgSCTNtSnp~~miaA 450 (896)
T Consensus 280 Dls~leP~Va~p~~P~~~v~v~~~~p~~~~~~~~~~~~~~~~a~~ym~~~~g~~~~~~~Id~a~IGSCTNgr~~Dl~~AA 359 (466)
T PRK05478 280 DAADIAPQVTWGTNPGQVISIDGKVPDPEDEADPVKRASAERALAYMGLKPGQPITDIKIDKVFIGSCTNSRIEDLRAAA 359 (466)
T ss_pred EHHHCCEEECCCCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 84313011128988443407523478824303634556787765531667895114771017999216899806899999
Q ss_pred HHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCEECCCCCCCCCC-CCCCCCCHHHHHCCCCCEEE
Q ss_conf 89998898649875867307970161899999998588577775053020553224212-77768830221011366358
Q gi|254780451|r 451 GLLARNAVRAGLKSKPWVKTSCAPGSQVSYEYLVQAGLVEYLEALGFSLVGFGCTTCIG-NSGALKKEISEVIHQKSLVV 529 (896)
Q Consensus 451 gllAkkAv~~Glkv~p~Vkt~l~PGS~~V~~~L~~~Gll~~L~~aGf~i~~~GCg~CiG-nsG~l~~~i~~~i~~~~l~~ 529 (896)
T Consensus 360 ~il------kG~kv~~~Vr~~v~PgS~~V~~~~~~~Gl~~~l~~aG~~i~~~GC~~CiG~~~~~l~~--------ge--- 422 (466)
T PRK05478 360 AVV------KGRKVAPGVRALVVPGSGLVKAQAEAEGLDKIFIEAGFEWREPGCSMCLAMNPDRLPP--------GE--- 422 (466)
T ss_pred HHH------CCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHCCCEECCCCCHHCCCCCCCCCCC--------CC---
T ss_conf 997------6986578832999789899999999867599999769688688353024869887999--------98---
Q ss_pred EEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 7863367666654685433100059789999985161222310023
Q gi|254780451|r 530 AGVLSGNRNFEGRISPDVEANYLLSPPLVVAYALAGNVRKNLIKDP 575 (896)
Q Consensus 530 ~sV~SgNRNFeGR~~p~~~~~yLaSP~lVvA~AiaG~I~~d~~~dp 575 (896)
T Consensus 423 ~~vSt~NRNF~GR~g~~~~-~yLaSP~~vaAsAi~G~I-----tdp 462 (466)
T PRK05478 423 RCASTSNRNFEGRQGKGGR-THLVSPAMAAAAAITGHF-----VDV 462 (466)
T ss_pred EEEEEECCCCCCCCCCCCC-EEECCHHHHHHHHHCCCC-----CCH
T ss_conf 8998748897888898988-787899999999966154-----885