HHsearch alignment for GI: 254780451 and conserved domain: cd01355
>cd01355 AcnX Putative Aconitase X catalytic domain. Putative Aconitase X catalytic domain. It is predicted by comparative genomic analysis. The proteins are mainly found in archaea and proteobacteria. They are distantly related to Aconitase family of proteins by sequence similarity and seconary structure prediction. The functions have not yet been experimentally characterized. Thus, the prediction should be treated with caution.
Probab=94.39 E-value=0.082 Score=32.32 Aligned_cols=65 Identities=25% Similarity=0.345 Sum_probs=47.5
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCEECCCCC
Q ss_conf 457531046765459998778899988986498758673079701618999999985885777750530205532
Q gi|254780451|r 430 VAIASITSCTNTFNPSVMIGAGLLARNAVRAGLKSKPWVKTSCAPGSQVSYEYLVQAGLVEYLEALGFSLVGFGC 504 (896)
Q Consensus 430 VvIAaIgSCTNtSnp~~miaAgllAkkAv~~Glkv~p~Vkt~l~PGS~~V~~~L~~~Gll~~L~~aGf~i~~~GC 504 (896)
T Consensus 279 ~DlV~lG-cPH~Sl~El~~la~ll------~gr~~~~~~~~~I~-Tsr~v~--a~~~G~~~~lE~aGv~vv~DTC 343 (389)
T cd01355 279 PDLVVLG-CPHASLEELRKLADLL------AGRRVAPSVPLYVT-TSRAVY--AKRMGYVDVIEKLGARVLTDTC 343 (389)
T ss_pred CCEEEEC-CCCCCHHHHHHHHHHH------HCCCCCCCCEEEEE-CCHHHH--HHHCCHHHHHHHCCCEEEEEEC
T ss_conf 1089977-9999999999999998------36777899629998-799999--7615889999974998993146