HHsearch alignment for GI: 254780451 and conserved domain: cd01577
>cd01577 IPMI_Swivel Aconatase-like swivel domain of 3-isopropylmalate dehydratase and related uncharacterized proteins. 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate 3-isopropylmalate. IPMI is involved in fungal and bacterial leucine biosynthesis and is also found in eukaryotes. This is the aconitase-like swivel domain, which is believed to undergo swivelling conformational change in the enzyme mechanism.
Probab=99.86 E-value=3.3e-22 Score=181.35 Aligned_cols=70 Identities=33% Similarity=0.544 Sum_probs=58.7
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCEEEEE
Q ss_conf 99946777867307999886676170899976478988850535523223317898988819897438997
Q gi|254780451|r 771 VVFAGVEYGNGSSRDWAAKGTRLLGVRSVIAESFERIHRSNLIGMGVIPFAFGKGISWKNLNIKGDEIINI 841 (896)
Q Consensus 771 VViAG~~YG~GSSRdwAAkgp~lLGVkAVIA~SFeRIHrsNLv~mGiLPL~F~~~~~~~~L~l~G~E~~~i 841 (896)
T Consensus 20 Ilvag~NFG~GSSREhA~~al~~~Gi~~VIa~SFa~If~~N~~n~GlLpi~~~~~~-~~~~~~~~g~ei~V 89 (91)
T cd01577 20 IIVAGKNFGCGSSREHAPWALKDAGIRAVIAESFARIFFRNAINNGLLPVTLADED-VEEVEAKPGDEVEV 89 (91)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCEEEECHHH-HHHHHCCCCCEEEE
T ss_conf 89956865778528999999998495499972399999998887785128868899-99997099988998