HHsearch alignment for GI: 254780451 and conserved domain: cd01581

>cd01581 AcnB Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle. Aconitase B catalytic domain. Aconitate hydratase B catalyses the formation of cis-aconitate from citrate as part of the TCA cycle. Aconitase has an active (4FE-4S) and an inactive (3FE-4S) form. The active cluster is part of the catalytic site that interconverts citrate, cis-aconitase and isocitrate. The domain architecture of aconitase B is different from other aconitases in that the catalytic domain is normally found at C-terminus for other aconitases, but it is at N-terminus for B family. It also has a HEAT domain before domain 4 which plays a role in protein-protein interaction. This alignment is the core domain including domains 1,2 and 3.
Probab=100.00  E-value=0  Score=748.66  Aligned_cols=407  Identities=22%  Similarity=0.310  Sum_probs=313.3

Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCHHHCC
Q ss_conf             79999999861235545777663645325220000035799999999999997199999928789813998683211005
Q gi|254780451|r   60 VTKEQIHAFVKWLDNKGTVESEVSYRFSRVLMQDFTGVPAVVDLAAMRDAIVVLGGDPQNINPLVPVDLVIDHSLIVDYS  139 (896)
Q Consensus        60 ~~~~~~~~~~~w~~~~~~~~~ei~f~p~Rv~~qD~Tg~pa~vdlaamR~~~~~~g~dp~~inp~vp~dlviDHsv~vd~~  139 (896)
T Consensus         1 i~EKIla~~~g--~~~V~~Ge~v~~~vD~~m~hD~t~p~~~~~~~~~----g~~~~~~~~------~v~~~dH~~p~~~-   67 (436)
T cd01581           1 LAQKIVGRACG--VKGVRPGTYCEPKMTTVGSQDTTGPMTRDELKEL----ACLGFSADL------VMQSFCHTAAYPK-   67 (436)
T ss_pred             CCHHHHHHHHC--CCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHH----CCCCCCCCC------EEEECCCCCCCCC-
T ss_conf             90899998609--9983699989984788854047548899999980----895558875------6786377888998-


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCEEEECCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEEE-EECCCC
Q ss_conf             998899989998875426789999-877421488078608876216778986335113103688617983013-206887
Q gi|254780451|r  140 GNKDAVTRNKDLEYQRNEERYRFL-KWGQKSFKNFRVVPPGTGICHQINLEYLGQSVWTKNENGENIAYPDTC-VGTDSH  217 (896)
Q Consensus       140 g~~~a~~~n~~~e~~rN~Ery~Fl-kwa~~~f~~~~v~pPG~GI~HQvnlE~la~vv~~~~~~~~~~a~Pdtl-VGtDSH  217 (896)
T Consensus        68 --~~------------~~~~~~~~~~f~~~-~-g~~~~~~g~GIcH~v-l~--------------~~~~PG~~ivG~DSH  116 (436)
T cd01581          68 --PV------------DVKTHRTLPDFISN-R-GGVALRPGDGVIHSW-LN--------------RMLLPDTVGTGGDSH  116 (436)
T ss_pred             --HH------------HHHHHHHHHHHHHH-C-CCCCCCCCCCEEEEE-EC--------------CCCCCCCEEEEECCC
T ss_conf             --78------------89999999999998-0-986448999636411-01--------------664799369834577


Q ss_pred             CCCCCCCHHHHCCCCHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC------------CCC
Q ss_conf             64445201232034348999997077514116728999997677864436889999999841022------------121
Q gi|254780451|r  218 TTMINALGILGWGVGGIEAEAAMLGCPISMLLPEVVGFEVTGSLQEGVTATDLVLTITQMLRKEG------------VVS  285 (896)
Q Consensus       218 T~~~galG~la~GVGg~eaea~mlGqp~~~~vPevigv~L~G~L~~gVtakDiiL~i~~~Lr~~G------------vvg  285 (896)
T Consensus       117 T~~~~g~---a~g~G~~~~a~a~atG~~w~~vPeti~v~l~G~l~~gv~aKDvil~i~~~~~~~~~~~~~~~~~~~~f~G  193 (436)
T cd01581         117 TRFPIGI---SFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVNAIPYYAIQQGLLTVEKKGKKNVFNG  193 (436)
T ss_pred             CCCCCCE---EECCCHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCE
T ss_conf             8887681---2355489999999617167747978999998647999887789999888875312056411476322232


Q ss_pred             EEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHH-HHHHHCCCCHHHHHHHHHHHHHH---------HCCC-
Q ss_conf             279996155001787563212000100372037751998999-99986399988999999874641---------0236-
Q gi|254780451|r  286 KFVEFFGSGFESMVLADRATIANMAPEYGATCGFFPVDRGTI-DYLRLSGRSNSRVDLVEAYTKVQ---------GMWR-  354 (896)
Q Consensus       286 k~vEf~G~gi~~LS~~dRaTIaNMa~E~GAt~gifp~De~T~-~YL~~tGR~~~~v~lve~Y~ka~---------~l~~-  354 (896)
T Consensus       194 ~~ie~--~Gv~~Ls~~~R~Ti~NMaiE~GAk~gi~~~D~~T~~~Yl~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~  270 (436)
T cd01581         194 RILEI--EGLPDLKVEQAFELTDASAERSAAACTVRLDKEPVIEYLESNVVL-MKIMIANGYDDARTLLRRIIAMEEWLA  270 (436)
T ss_pred             EEEEE--CCCCCCCHHHHHHHCCHHHHHCCCEEEEECCHHHHHHHHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf             68996--267777865665110501553662323616828899999852356-677665056525567766567898850


Q ss_pred             ---CCCCCCCCCCCEEEEEECCCC-CCHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCE
Q ss_conf             ---767667886306999980314-3012265665641367773011668766400110023210245788888755544
Q gi|254780451|r  355 ---EDIDYEKVAFTKKMKLDLGNV-SPSVAGPRRPESRLSLSEVPSSFVTEMNEYYKKSHTLDEKYPVKGCDFHLKHGDV  430 (896)
Q Consensus       355 ---~~~~d~~a~Y~~vieiDLs~i-eP~VAgP~~P~d~v~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~V  430 (896)
T Consensus       271 ~~~~~~~D~da~Y~~~i~iDls~l~EP~vA~P~~pdnv~~v~e~~g~-------------------------------~I  319 (436)
T cd01581         271 NPPLLEPDADAEYAAVIEIDLDDIKEPILACPNDPDDVKLLSEVAGK-------------------------------KI  319 (436)
T ss_pred             CCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCHHCCCHHHHCCC-------------------------------CC
T ss_conf             87642079999753189950787767756899981110342443388-------------------------------54


Q ss_pred             EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCEECCCCCCCCCCC
Q ss_conf             57531046765459998778899988986498758673079701618999999985885777750530205532242127
Q gi|254780451|r  431 AIASITSCTNTFNPSVMIGAGLLARNAVRAGLKSKPWVKTSCAPGSQVSYEYLVQAGLVEYLEALGFSLVGFGCTTCIGN  510 (896)
Q Consensus       431 vIAaIgSCTNtSnp~~miaAgllAkkAv~~Glkv~p~Vkt~l~PGS~~V~~~L~~~Gll~~L~~aGf~i~~~GCg~CiGn  510 (896)
T Consensus       320 D~vfIGSCT~-r~~Dl~~AA~iL------kg~k~~~-vr~~V~PgS~~V~~~a~~~Gl~~~f~~AGa~v~~pgCg~CiG~  391 (436)
T cd01581         320 DEVFIGSCMT-NIGHFRAAAKIL------RGKEFKP-TRLWVAPPTRMDWAILQEEGYYSIFGDAGARTEMPGCSLCMGN  391 (436)
T ss_pred             CEEEEECCCC-CHHHHHHHHHHH------HCCCCCC-CCEEEECCCHHHHHHHHHCCHHHHHHHCCCEECCCCCHHHHCC
T ss_conf             0224412578-826899999998------1677788-6589979979999999985819899966969878761542480


Q ss_pred             CCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCC
Q ss_conf             776883022101136635878633676666546854331000597899999851612
Q gi|254780451|r  511 SGALKKEISEVIHQKSLVVAGVLSGNRNFEGRISPDVEANYLLSPPLVVAYALAGNV  567 (896)
Q Consensus       511 sG~l~~~i~~~i~~~~l~~~sV~SgNRNFeGR~~p~~~~~yLaSP~lVvA~AiaG~I  567 (896)
T Consensus       392 ~~~~~--------~ge---~~iSTsNRNF~GRmG~~a~-vyLaSP~~vAAsAi~G~I  436 (436)
T cd01581         392 QARVA--------DGA---TVFSTSTRNFDNRVGKGAE-VYLGSAELAAVCALLGRI  436 (436)
T ss_pred             CCCCC--------CCC---EEEEEECCCCCCCCCCCCC-EEECCHHHHHHHHHCCCC
T ss_conf             88689--------999---8997228898988999984-897899999999951729