HHsearch alignment for GI: 254780451 and conserved domain: cd01585
>cd01585 AcnA_Bact Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Bacterial Aconitase-like catalytic domain. Aconitase (aconitate hydratase or citrate hydrolyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediate product during the course of the reaction. This distinct subfamily is found only in bacteria and Archaea. Its exact characteristics are not known.
Probab=100.00 E-value=0 Score=864.84 Aligned_cols=379 Identities=34% Similarity=0.553 Sum_probs=339.9
Q ss_pred CHHHEECCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 25220000035799999999999997199999928789813998683211005998899989998875426789999877
Q gi|254780451|r 87 SRVLMQDFTGVPAVVDLAAMRDAIVVLGGDPQNINPLVPVDLVIDHSLIVDYSGNKDAVTRNKDLEYQRNEERYRFLKWG 166 (896)
Q Consensus 87 ~Rv~~qD~Tg~pa~vdlaamR~~~~~~g~dp~~inp~vp~dlviDHsv~vd~~g~~~a~~~n~~~e~~rN~Ery~Flkwa 166 (896)
T Consensus 1 D~~~~hD~T~p~a~~~l~~-------~g~--~~~~~~~~v-~~~DH~~p~~~---------------~~~a~~~~~lr~f 55 (380)
T cd01585 1 DQTLTQDATGTMAYLQFEA-------MGV--DRVRTELSV-SYVDHNTLQTD---------------FENADDHRFLQTV 55 (380)
T ss_pred CCCEEEECCHHHHHHHHHH-------CCC--CCCCCCCEE-EEECCCCCCCC---------------CCCHHHHHHHHHH
T ss_conf 9633400448999999998-------499--852899748-97088998988---------------4388999999999
Q ss_pred HHHCCCEEEECCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEE-EEEECCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCC
Q ss_conf 4214880786088762167789863351131036886179830-132068876444520123203434899999707751
Q gi|254780451|r 167 QKSFKNFRVVPPGTGICHQINLEYLGQSVWTKNENGENIAYPD-TCVGTDSHTTMINALGILGWGVGGIEAEAAMLGCPI 245 (896)
Q Consensus 167 ~~~f~~~~v~pPG~GI~HQvnlE~la~vv~~~~~~~~~~a~Pd-tlVGtDSHT~~~galG~la~GVGg~eaea~mlGqp~ 245 (896)
T Consensus 56 a~~~-gi~~~~~g~GI~Hqv~~E--------------~~~~PG~~ivg~DSHT~t~GalGa~a~GvG~td~a~~latg~~ 120 (380)
T cd01585 56 AARY-GIYFSRPGNGICHQVHLE--------------RFAVPGKTLLGSDSHTPTAGGLGMLAIGAGGLDVALAMAGEPY 120 (380)
T ss_pred HHHH-CCEECCCCCCEEEEECCC--------------CCCCCCCEEEECCCCCCCCCCCCCCEECCCHHHHHHHHCCCEE
T ss_conf 9981-980628999768478642--------------5668998798476566878721126878689999999816868
Q ss_pred EECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCHH
Q ss_conf 41167289999976778644368899999998410221212799961550017875632120001003720377519989
Q gi|254780451|r 246 SMLLPEVVGFEVTGSLQEGVTATDLVLTITQMLRKEGVVSKFVEFFGSGFESMVLADRATIANMAPEYGATCGFFPVDRG 325 (896)
Q Consensus 246 ~~~vPevigv~L~G~L~~gVtakDiiL~i~~~Lr~~Gvvgk~vEf~G~gi~~LS~~dRaTIaNMa~E~GAt~gifp~De~ 325 (896)
T Consensus 121 w~~vPeti~v~l~G~l~~gV~aKDviL~ii~~lg~~g~~~~~iEF~G~~i~~ls~~~R~Tl~NMa~E~GA~~gi~~~De~ 200 (380)
T cd01585 121 YIPMPKVVGVRLTGELPPWVTAKDVILELLRRLTVKGGVGKIFEYTGPGVATLSVPERATITNMGAELGATTSIFPSDER 200 (380)
T ss_pred EEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCHH
T ss_conf 88789789999982379997789999999999744466536999967420228887754565155234552667447389
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCCCEEEHHHHHHHHHHHHHHH
Q ss_conf 99999863999889999998746410236767667886306999980314301226566564136777301166876640
Q gi|254780451|r 326 TIDYLRLSGRSNSRVDLVEAYTKVQGMWREDIDYEKVAFTKKMKLDLGNVSPSVAGPRRPESRLSLSEVPSSFVTEMNEY 405 (896)
Q Consensus 326 T~~YL~~tGR~~~~v~lve~Y~ka~~l~~~~~~d~~a~Y~~vieiDLs~ieP~VAgP~~P~d~v~l~~v~~~~~~~~~~~ 405 (896)
T Consensus 201 t~~yl~~~~~~~~~--------------~~l~~D~dA~Y~~~i~iDls~leP~vA~P~~pdnv~~v~e~~g--------- 257 (380)
T cd01585 201 TREFLAAQGREDDW--------------VELAADADAEYDEEIEIDLSELEPLIARPHSPDNVVPVREVAG--------- 257 (380)
T ss_pred HHHHHHHHCCHHHH--------------HHCCCCCCCCEEEEEEEEHHHCCEEECCCCCCCCEEECCCCCC---------
T ss_conf 99999872980443--------------1035899997138999986546233269989876668622379---------
Q ss_pred CCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 01100232102457888887555445753104676545999877889998898649875867307970161899999998
Q gi|254780451|r 406 YKKSHTLDEKYPVKGCDFHLKHGDVAIASITSCTNTFNPSVMIGAGLLARNAVRAGLKSKPWVKTSCAPGSQVSYEYLVQ 485 (896)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~l~~g~VvIAaIgSCTNtSnp~~miaAgllAkkAv~~Glkv~p~Vkt~l~PGS~~V~~~L~~ 485 (896)
T Consensus 258 ----------------------~~Id~vfIGSCTngr~eDl~~aA~iL------kg~kv~~~Vr~~V~P~S~~V~~~a~~ 309 (380)
T cd01585 258 ----------------------IKVDQVAIGSCTNSSYEDLMTVAAIL------KGRRVHPHVSMVVAPGSKQVLEMLAR 309 (380)
T ss_pred ----------------------CCEEEEEEEECCCCCCHHHHHHHHHH------CCCCCCCCCCEECCCCCHHHHHHHHH
T ss_conf ----------------------61267686532799987899999997------49987887543038986899999998
Q ss_pred CCCHHHHHHHCCEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHC
Q ss_conf 58857777505302055322421277768830221011366358786336766665468543310005978999998516
Q gi|254780451|r 486 AGLVEYLEALGFSLVGFGCTTCIGNSGALKKEISEVIHQKSLVVAGVLSGNRNFEGRISPDVEANYLLSPPLVVAYALAG 565 (896)
Q Consensus 486 ~Gll~~L~~aGf~i~~~GCg~CiGnsG~l~~~i~~~i~~~~l~~~sV~SgNRNFeGR~~p~~~~~yLaSP~lVvA~AiaG 565 (896)
T Consensus 310 ~G~~~~~~~aG~~i~~pgCg~C~G~~~~~~--------~ge---v~vsT~NRNF~GRmG~~~~~~yLaSP~~vaasAi~G 378 (380)
T cd01585 310 NGALADLLAAGARILESACGPCIGMGQAPP--------TGG---VSVRTFNRNFEGRSGTKDDLVYLASPEVAAAAALTG 378 (380)
T ss_pred CCCHHHHHHCCCEECCCCCHHHHCCCCCCC--------CCC---EEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHCC
T ss_conf 788878997697888874554338299899--------998---899730789876789988968977999999999554
Q ss_pred CC
Q ss_conf 12
Q gi|254780451|r 566 NV 567 (896)
Q Consensus 566 ~I 567 (896)
T Consensus 379 ~I 380 (380)
T cd01585 379 VI 380 (380)
T ss_pred CC
T ss_conf 39