HHsearch alignment for GI: 254780451 and conserved domain: cd01674
>cd01674 Homoaconitase_Swivel Homoaconitase swivel domain. This family includes homoaconitase and other uncharacterized proteins of the Aconitase family. Homoaconitase is part of an unusual lysine biosynthesis pathway found only in filamentous fungi, in which lysine is synthesized via the alpha-aminoadipate pathway. In this pathway, homoaconitase catalyzes the conversion of cis-homoaconitic acid into homoisocitric acid. The reaction mechanism is believed to be similar to that of other aconitases. This is the swivel domain, which is believed to undergo swivelling conformational change in the enzyme mechanism.
Probab=99.81 E-value=2e-20 Score=168.37 Aligned_cols=99 Identities=25% Similarity=0.372 Sum_probs=74.2
Q ss_pred CCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEECCCCC
Q ss_conf 58857233164565554473788898749886563145653023577766520360122321257776577224538997
Q gi|254780451|r 673 GDKITTDHISPAGSIPLQSAAASYLRQRGVKEKDFNQFGTRRGNHEVMMRGTFSNIRICNYMLGEEGKKGGYTIHYPSKE 752 (896)
Q Consensus 673 GD~iTTDHISPAG~I~~~spAg~yL~~~Gv~~~dfNsygsRRgNhevM~RGtFaNirl~N~l~~~~~~egg~T~~~p~~~ 752 (896)
T Consensus 3 ~DNIDTD~IiP~----------ryl~~~~~~~~-------------~~~~~~~~~~d--p~f------------------ 39 (129)
T cd01674 3 ADNLNTDGIYPG----------KYTYQDDITPE-------------KMAEVCMENYD--SEF------------------ 39 (129)
T ss_pred CHHCCHHHCCCH----------HHCCCCCCCHH-------------HHHHHHCCCCC--CCC------------------
T ss_conf 234666325155----------54587789877-------------87344321369--753------------------
Q ss_pred EEEHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHCCCCCEEEEEECCC
Q ss_conf 873799999899819988999467778673079998866761708999764789888505355232233178
Q gi|254780451|r 753 ELFIYDAAMRYKVDQVPLVVFAGVEYGNGSSRDWAAKGTRLLGVRSVIAESFERIHRSNLIGMGVIPFAFGK 824 (896)
Q Consensus 753 ~~~iydaA~~Y~~~~~plVViAG~~YG~GSSRdwAAkgp~lLGVkAVIA~SFeRIHrsNLv~mGiLPL~F~~ 824 (896)
T Consensus 40 -------~~~~k~---g~ILVaG~NFGcGSSREhA~~aL~~~Gi~aVIA~SFa~IF~rN~iNnGLlpI~lP~ 101 (129)
T cd01674 40 -------STKTKQ---GDILVSGFNFGTGSSREQAATALLAKGIPLVVSGSFGNIFSRNSINNALLSIELPF 101 (129)
T ss_pred -------CCCCCC---CCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCEEECHH
T ss_conf -------333678---88899668657673488999999984997999852999999777871888687649