RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780452|ref|YP_003064865.1| hypothetical protein CLIBASIA_01685 [Candidatus Liberibacter asiaticus str. psy62] (259 letters) >2qzb_A Uncharacterized protein YFEY; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Escherichia coli K12} (A:) Length = 166 Score = 25.9 bits (57), Expect = 5.8 Identities = 8/32 (25%), Positives = 13/32 (40%) Query: 194 LTMSAMGLVIFSALTAYDTQKIKEAYSDRYDV 225 +S G+ +A T Q I +A Y + Sbjct: 14 TKVSEQGVGELTASTPLQEQAIADALDGDYRL 45 >1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} (A:1-181) Length = 181 Score = 25.5 bits (55), Expect = 7.7 Identities = 10/72 (13%), Positives = 19/72 (26%), Gaps = 2/72 (2%) Query: 16 GFGSTIDQGLRAYMIRVYNLMALGLGVTGIMSFLVNILATTVDPDAASIIINRGVMLTGF 75 + N G ++ L N + P +++ G G Sbjct: 51 LMHQCEIWRELFSPLHALNFGIGGDSTQHVLWRLENGELEHIRPKI--VVVWVGTNNHGH 108 Query: 76 GALMYTSPLRWI 87 A T ++ I Sbjct: 109 TAEQVTGGIKAI 120 >1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} (A:143-177,A:253-311) Length = 94 Score = 25.3 bits (56), Expect = 8.3 Identities = 11/21 (52%), Positives = 15/21 (71%) Query: 59 PDAASIIINRGVMLTGFGALM 79 P+ S II RG+ LTG G+L+ Sbjct: 53 PELVSDIIERGIFLTGGGSLL 73 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.331 0.142 0.405 Gapped Lambda K H 0.267 0.0624 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 1,781,697 Number of extensions: 72372 Number of successful extensions: 255 Number of sequences better than 10.0: 1 Number of HSP's gapped: 254 Number of HSP's successfully gapped: 16 Length of query: 259 Length of database: 4,956,049 Length adjustment: 87 Effective length of query: 172 Effective length of database: 2,015,014 Effective search space: 346582408 Effective search space used: 346582408 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 54 (24.8 bits)