RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780452|ref|YP_003064865.1| hypothetical protein CLIBASIA_01685 [Candidatus Liberibacter asiaticus str. psy62] (259 letters) >d1d4m1_ b.121.4.1 (1:) Human enterovirus B coat proteins {Human coxsackievirus A9 [TaxId: 12067]} Length = 284 Score = 24.8 bits (54), Expect = 7.9 Identities = 11/52 (21%), Positives = 23/52 (44%) Query: 137 SIVQTFFITAASFGSLSLYGYTTKRDLGPIGSFMIMGAFGLFLLSLVNLFMR 188 + F+ ++F YGY T +LG I + G+ + S + ++ + Sbjct: 190 NAYSNFYDGWSNFDQRGSYGYNTLNNLGHIYVRHVSGSSPHPITSTIRVYFK 241 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.331 0.142 0.405 Gapped Lambda K H 0.267 0.0442 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 883,975 Number of extensions: 37397 Number of successful extensions: 152 Number of sequences better than 10.0: 1 Number of HSP's gapped: 150 Number of HSP's successfully gapped: 9 Length of query: 259 Length of database: 2,407,596 Length adjustment: 83 Effective length of query: 176 Effective length of database: 1,268,006 Effective search space: 223169056 Effective search space used: 223169056 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 52 (24.5 bits)