HHsearch alignment for GI: 254780453 and conserved domain: PRK05437

>PRK05437 isopentenyl pyrophosphate isomerase; Provisional.
Probab=92.06  E-value=0.32  Score=28.30  Aligned_cols=58  Identities=21%  Similarity=0.279  Sum_probs=35.0

Q ss_pred             HHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHHCCCC------CHHHHHHHHHHHHH
Q ss_conf             554420244035510113578657984003698999965998999985330888------88999999999866
Q gi|254780453|r  168 MVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAA------DPVSAAQEFQRAIS  235 (238)
Q Consensus       168 ~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~a~------dP~~aa~~i~~~i~  235 (238)
T Consensus       254 e~~~~~~~~~iiasGGIR~gl-D---------i~KaLaLGA~~vgia~p~L~~l~~~g~e~~~~~l~~~~~elk  317 (351)
T PRK05437        254 EARSALPDLPIIASGGIRTGL-D---------IAKALALGADAVGLAGPFLKAALEGGVEAVIEEIEGWIEELK  317 (351)
T ss_pred             HHHHHCCCCEEEEECCCCCHH-H---------HHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             999747998299627878789-9---------999999551077758999999985699999999999999999