HHsearch alignment for GI: 254780453 and conserved domain: PRK11858

>PRK11858 aksA trans-homoaconitate synthase; Reviewed.
Probab=94.01  E-value=0.53  Score=26.90  Aligned_cols=167  Identities=17%  Similarity=0.208  Sum_probs=87.8

Q ss_pred             CCHHHHHHHHHHHCC-CCCEEEECHHHHHCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECC-
Q ss_conf             998999999997388-522899868998425589999998515466787764042467898776521567508997246-
Q gi|254780453|r   22 PTVKEAERIVSILSD-TVSFYKIGYHLSFSGGLELARDLISDGKSVFLDMKLFDIGSSVTAAIEHIANMGVAMLTVHAY-   99 (238)
Q Consensus        22 ~~~~e~l~l~~~l~~-~i~~iKig~~l~~~~G~~~i~~l~k~~~~If~D~K~~DIpnTv~~~v~~~~~~g~d~iTvH~~-   99 (238)
T Consensus        23 fs~~~K~~ia~~L~~~GV~~IEvG~P~~~~~e~~~~~~i~~~~l~~~----i~~~~R~~~~di~~a~~~g~~~v~i~~~~   98 (378)
T PRK11858         23 FTNEEKLAIARMLDEIGVDQIEAGFPAVSEDEKEAIKAIAKLGLNAS----ILAWNRAVKSDIDASIDCGVDAVHIFIAT   98 (378)
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCE----EEEECCCCHHHHHHHHHCCCCEEEEEECC
T ss_conf             99999999999999819899999477778348999999985679845----88740357877999985796989999606


Q ss_pred             -C---------------HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC--
Q ss_conf             -0---------------4677776530235531046664147776887652012104887654454211024431113--
Q gi|254780453|r  100 -P---------------QTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARDIGMGGIVC--  161 (238)
Q Consensus       100 -~---------------~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~~a~~~g~~GvV~--  161 (238)
T Consensus        99 Sd~h~~~~l~~t~~e~l~~~~~~v~~Ak~~Gl~v-~f------~~eD~----~r~~-~~~l~~~~~~a~~~Gad~I~l~D  166 (378)
T PRK11858         99 SDIHLKYKLKKTREEVLERLVEAVEYAKDHGLYV-SF------SAEDA----SRTD-LDFLIEAAKAAEEAGADRVRFCD  166 (378)
T ss_pred             CHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEE-EE------EEECC----CCCC-HHHHHHHHHHHHHCCCCEEEECC
T ss_conf             7999999968998999999999999999769869-99------44012----5689-99999999999974998999636


Q ss_pred             -----CCHHH----HHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHCCCCEEE
Q ss_conf             -----41034----4554420244035510113578657984003698999965998999
Q gi|254780453|r  162 -----SPQEV----RMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIV  212 (238)
Q Consensus       162 -----s~~ei----~~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iV  212 (238)
T Consensus       167 T~G~~~P~~v~~~v~~l~~~~~-----~~i~~H~H-Nd--~GlAvANalaAv~AGa~~v~  218 (378)
T PRK11858        167 TVGILDPFTMYELVKELVEAVD-----IPIEVHCH-ND--FGMATANAIAGIEAGATQVH  218 (378)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCC-----CCEEEEEE-CC--CCHHHHHHHHHHHHCCCEEE
T ss_conf             5566699999999999997269-----85599970-77--55599999999980999899