HHsearch alignment for GI: 254780453 and conserved domain: PRK11858
>PRK11858 aksA trans-homoaconitate synthase; Reviewed.
Probab=94.01 E-value=0.53 Score=26.90 Aligned_cols=167 Identities=17% Similarity=0.208 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHCC-CCCEEEECHHHHHCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECC-
Q ss_conf 998999999997388-522899868998425589999998515466787764042467898776521567508997246-
Q gi|254780453|r 22 PTVKEAERIVSILSD-TVSFYKIGYHLSFSGGLELARDLISDGKSVFLDMKLFDIGSSVTAAIEHIANMGVAMLTVHAY- 99 (238)
Q Consensus 22 ~~~~e~l~l~~~l~~-~i~~iKig~~l~~~~G~~~i~~l~k~~~~If~D~K~~DIpnTv~~~v~~~~~~g~d~iTvH~~- 99 (238)
T Consensus 23 fs~~~K~~ia~~L~~~GV~~IEvG~P~~~~~e~~~~~~i~~~~l~~~----i~~~~R~~~~di~~a~~~g~~~v~i~~~~ 98 (378)
T PRK11858 23 FTNEEKLAIARMLDEIGVDQIEAGFPAVSEDEKEAIKAIAKLGLNAS----ILAWNRAVKSDIDASIDCGVDAVHIFIAT 98 (378)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCE----EEEECCCCHHHHHHHHHCCCCEEEEEECC
T ss_conf 99999999999999819899999477778348999999985679845----88740357877999985796989999606
Q ss_pred -C---------------HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC--
Q ss_conf -0---------------4677776530235531046664147776887652012104887654454211024431113--
Q gi|254780453|r 100 -P---------------QTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARDIGMGGIVC-- 161 (238)
Q Consensus 100 -~---------------~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~~a~~~g~~GvV~-- 161 (238)
T Consensus 99 Sd~h~~~~l~~t~~e~l~~~~~~v~~Ak~~Gl~v-~f------~~eD~----~r~~-~~~l~~~~~~a~~~Gad~I~l~D 166 (378)
T PRK11858 99 SDIHLKYKLKKTREEVLERLVEAVEYAKDHGLYV-SF------SAEDA----SRTD-LDFLIEAAKAAEEAGADRVRFCD 166 (378)
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEE-EE------EEECC----CCCC-HHHHHHHHHHHHHCCCCEEEECC
T ss_conf 7999999968998999999999999999769869-99------44012----5689-99999999999974998999636
Q ss_pred -----CCHHH----HHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHCCCCEEE
Q ss_conf -----41034----4554420244035510113578657984003698999965998999
Q gi|254780453|r 162 -----SPQEV----RMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIV 212 (238)
Q Consensus 162 -----s~~ei----~~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iV 212 (238)
T Consensus 167 T~G~~~P~~v~~~v~~l~~~~~-----~~i~~H~H-Nd--~GlAvANalaAv~AGa~~v~ 218 (378)
T PRK11858 167 TVGILDPFTMYELVKELVEAVD-----IPIEVHCH-ND--FGMATANAIAGIEAGATQVH 218 (378)
T ss_pred CCCCCCHHHHHHHHHHHHHHCC-----CCEEEEEE-CC--CCHHHHHHHHHHHHCCCEEE
T ss_conf 5566699999999999997269-----85599970-77--55599999999980999899