HHsearch alignment for GI: 254780453 and conserved domain: PRK13117
>PRK13117 consensus.
Probab=97.60 E-value=0.0076 Score=38.80 Aligned_cols=198 Identities=21% Similarity=0.270 Sum_probs=106.8
Q ss_pred EEEECCCHHHHHHHHHHH-CCCCCEEEECHHHHHC--CCHHHHHHHH---HHCH---HHH---HHH--HHCCHH------
Q ss_conf 996079989999999973-8852289986899842--5589999998---5154---667---877--640424------
Q gi|254780453|r 17 VGLDLPTVKEAERIVSIL-SDTVSFYKIGYHLSFS--GGLELARDLI---SDGK---SVF---LDM--KLFDIG------ 76 (238)
Q Consensus 17 vALD~~~~~e~l~l~~~l-~~~i~~iKig~~l~~~--~G~~~i~~l~---k~~~---~If---~D~--K~~DIp------ 76 (238)
T Consensus 23 itaG~P~~~~t~~~~~~l~~~GaDiiElGiPfSDP~ADGpvIq~A~~rAL~~G~~~~~~~~~~~~ir~~~~~~pivlM~Y 102 (268)
T PRK13117 23 VTLGDPSPELSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNANLRALAAGVTPAQCFELLAKIRAKYPTIPIGLLLY 102 (268)
T ss_pred ECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 72708997999999999996699989978998885655799999999998459969999999988500478987799732
Q ss_pred -HHH-----HHHHHHHCCCCCEEEEEECCC-HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf -678-----987765215675089972460-4677776530235531046664147776887652012104887654454
Q gi|254780453|r 77 -SSV-----TAAIEHIANMGVAMLTVHAYP-QTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAV 149 (238)
Q Consensus 77 -nTv-----~~~v~~~~~~g~d~iTvH~~~-~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~ 149 (238)
T Consensus 103 ~N~i~~~G~e~F~~~~~~aGvdGvIipDLP~eE~~~~~~~~~~~gl~~I~lv~Pt-t~~~Ri~~i~~------~a~GFiY 175 (268)
T PRK13117 103 ANLVFANGIDNFYARCAEAGVDSVLIADVPVEESAPFRQAAKKHGIAPIFICPPN-ADDDTLRQIAS------LGRGYTY 175 (268)
T ss_pred CCHHHHCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCC-CCHHHHHHHHH------HCCCEEE
T ss_conf 6289871799999999976987798579997885899999986798379984799-99999999997------4798599
Q ss_pred HHHHCCCCCCCC-CC----HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHH---HHHHCCCCEEEECCHHCC--
Q ss_conf 211024431113-41----03445544202440355101135786579840036989---999659989999853308--
Q gi|254780453|r 150 QARDIGMGGIVC-SP----QEVRMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPE---TALKYGASHIVVSRPIVR-- 219 (238)
Q Consensus 150 ~a~~~g~~GvV~-s~----~ei~~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~---~Ai~~GaD~iVVGR~I~~-- 219 (238)
T Consensus 176 ~vs~~GvTG~~~~~~~~~~~~i~~ik~~t-~~Pv--~vGFGIs-----------~~e~v~~~~~~~aDGvIVGSaiV~~i 241 (268)
T PRK13117 176 LLSRAGVTGAENKAAAPLNHLVEKLKEYN-APPP--LQGFGIS-----------EPEQVKAAIKAGAAGAISGSAIVKII 241 (268)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHCC-CCCE--EEEECCC-----------CHHHHHHHHHCCCCEEEECHHHHHHH
T ss_conf 98367778898666277999999999647-9986--9983789-----------99999999863899899878999999
Q ss_pred ---CCCHHH---HHHHHHHHHH
Q ss_conf ---888899---9999999866
Q gi|254780453|r 220 ---AADPVS---AAQEFQRAIS 235 (238)
Q Consensus 220 ---a~dP~~---aa~~i~~~i~ 235 (238)
T Consensus 242 ~~~~~~~~~~~~~v~~~v~~Lk 263 (268)
T PRK13117 242 EKNLDNPEKMLAELAEFVRAMK 263 (268)
T ss_pred HHCCCCHHHHHHHHHHHHHHHH
T ss_conf 8716688999999999999999