HHsearch alignment for GI: 254780453 and conserved domain: TIGR03128
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.
Probab=100.00 E-value=2.4e-42 Score=294.49 Aligned_cols=201 Identities=23% Similarity=0.334 Sum_probs=175.8
Q ss_pred CEEEEEECCCHHHHHHHHHHHCCCCCEEEECHHHHHCCCHHHHHHHHHH--CHHHHHHHHHCCHHHHHHHHHHHHCCCCC
Q ss_conf 8899960799899999999738852289986899842558999999851--54667877640424678987765215675
Q gi|254780453|r 14 RLVVGLDLPTVKEAERIVSILSDTVSFYKIGYHLSFSGGLELARDLISD--GKSVFLDMKLFDIGSSVTAAIEHIANMGV 91 (238)
Q Consensus 14 ~livALD~~~~~e~l~l~~~l~~~i~~iKig~~l~~~~G~~~i~~l~k~--~~~If~D~K~~DIpnTv~~~v~~~~~~g~ 91 (238)
T Consensus 1 kLqvALD~~~~~~A~~i~~~~~~~v~~ikvG~~L~~~~G~~~v~~lk~~~p~~~I~~DlK~~D~g~~~~---~~~~~~Ga 77 (206)
T TIGR03128 1 KLQLALDLLDIEEALELAEKVADYVDIIEIGTPLIKNEGIEAVKEMKEAFPDRKVLADLKTMDAGEYEA---EQAFAAGA 77 (206)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHCHHHHHHHHHHCCCCEEEEEEEECCCHHHHH---HHHHHCCC
T ss_conf 959995799999999999970355629998969999768999999998789997999950447438999---99997289
Q ss_pred EEEEEECCC--HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC-CCCCHHHHH
Q ss_conf 089972460--46777765302355310466641477768876520121048876544542110244311-134103445
Q gi|254780453|r 92 AMLTVHAYP--QTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARDIGMGGI-VCSPQEVRM 168 (238)
Q Consensus 92 d~iTvH~~~--~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~~a~~~g~~Gv-V~s~~ei~~ 168 (238)
T Consensus 78 d~itVh~~~~~~ti~~a~~~a~~~~~~v~vd-l~~~~~------------~----~~~a~~~~~~g~d~v~~h~g~d~~~ 140 (206)
T TIGR03128 78 DIVTVLGVADDATIKGAVKAAKKHGKEVQVD-LINVKD------------K----VKRAKELKELGADYIGVHTGLDEQA 140 (206)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHCCCEEEEE-ECCCCC------------H----HHHHHHHHHCCCCEEEEECCCCHHH
T ss_conf 8999943489799999999999739979999-747898------------8----9999999975898899502500443
Q ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHHCCCCCHHHHHHHHHHHH
Q ss_conf 544202440355101135786579840036989999659989999853308888899999999986
Q gi|254780453|r 169 VREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQRAI 234 (238)
Q Consensus 169 ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~a~dP~~aa~~i~~~i 234 (238)
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~v~gGi~~~t~~~ai~~Gad~vVVGR~It~A~dP~~aa~~i~e~i 206 (206)
T TIGR03128 141 KGQNPFEDLQTILKLVKEARVAVAGGINLDTIPDVIKLGPDIVIVGGAITKAADPAEAARQIRKLI 206 (206)
T ss_pred CCCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHC
T ss_conf 267988999999862578736367986835699998669999998961247999999999999749