HHsearch alignment for GI: 254780453 and conserved domain: cd00429
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=98.67 E-value=7.4e-08 Score=71.26 Aligned_cols=192 Identities=20% Similarity=0.316 Sum_probs=110.6
Q ss_pred EEEEECCCHHHHHHHHHHHCCCCCEEEE-----CHHHHHCCCHHHHHHHHHHCHHHHHHHHHC-CHHHHHHHHHHHHCCC
Q ss_conf 9996079989999999973885228998-----689984255899999985154667877640-4246789877652156
Q gi|254780453|r 16 VVGLDLPTVKEAERIVSILSDTVSFYKI-----GYHLSFSGGLELARDLISDGKSVFLDMKLF-DIGSSVTAAIEHIANM 89 (238)
Q Consensus 16 ivALD~~~~~e~l~l~~~l~~~i~~iKi-----g~~l~~~~G~~~i~~l~k~~~~If~D~K~~-DIpnTv~~~v~~~~~~ 89 (238)
T Consensus 6 il~ad~~~l~~~i~~~~~~g--~d~lHiDimDG~Fvpn~t~g~~~v~~i~~~t-~~~~DvHLMv~~P---~~~i~~~~~~ 79 (211)
T cd00429 6 ILSADFANLGEELKRLEEAG--ADWIHIDVMDGHFVPNLTFGPPVVKALRKHT-DLPLDVHLMVENP---ERYIEAFAKA 79 (211)
T ss_pred HHHCCHHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCHHHHHHHHHHC-CCCEEEEEEECCH---HHHHHHHHHH
T ss_conf 53179999999999999769--9989995757972786675989999998757-9970589987188---7769999970
Q ss_pred CCEEEEEECC-CHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC--CCCCC-HH
Q ss_conf 7508997246-04677776530235531046664147776887652012104887654454211024431--11341-03
Q gi|254780453|r 90 GVAMLTVHAY-PQTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARDIGMGG--IVCSP-QE 165 (238)
Q Consensus 90 g~d~iTvH~~-~~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~~a~~~g~~G--vV~s~-~e 165 (238)
T Consensus 80 g~d~I~~H~E~~~~~~~~i~~ik~~g~~~-Glal~p~T~~~~l~~~------l~~~D~vliMtV~PGf~GQ~f~~~~~~k 152 (211)
T cd00429 80 GADIITFHAEATDHLHRTIQLIKELGMKA-GVALNPGTPVEVLEPY------LDEVDLVLVMSVNPGFGGQKFIPEVLEK 152 (211)
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHCCCCC-EEEECCCCCHHHHHHH------HHHHCEEEEEEECCCCCCCCCCHHHHHH
T ss_conf 99889986432208999999999739872-3575489998999999------9751522798746887887545679999
Q ss_pred HHHHHHHHC---CCCEE-EEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHHCCCCCHHHHHHHHH
Q ss_conf 445544202---44035-5101135786579840036989999659989999853308888899999999
Q gi|254780453|r 166 VRMVREIVG---HNMVI-VTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQ 231 (238)
Q Consensus 166 i~~ir~~~~---~~~~~-itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~a~dP~~aa~~i~ 231 (238)
T Consensus 153 i~~l~~~~~~~~~~~~I~vDGGI~~~-----------~i~~l~~~Gad~~V~GS~iF~~~d~~~~i~~l~ 211 (211)
T cd00429 153 IRKLRELIPENNLNLLIEVDGGINLE-----------TIPLLAEAGADVLVAGSALFGSDDYAEAIKELR 211 (211)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCHH-----------HHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHC
T ss_conf 99999999864998599996785989-----------999999859999997937758999999999719