HHsearch alignment for GI: 254780453 and conserved domain: cd00429

>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=98.67  E-value=7.4e-08  Score=71.26  Aligned_cols=192  Identities=20%  Similarity=0.316  Sum_probs=110.6

Q ss_pred             EEEEECCCHHHHHHHHHHHCCCCCEEEE-----CHHHHHCCCHHHHHHHHHHCHHHHHHHHHC-CHHHHHHHHHHHHCCC
Q ss_conf             9996079989999999973885228998-----689984255899999985154667877640-4246789877652156
Q gi|254780453|r   16 VVGLDLPTVKEAERIVSILSDTVSFYKI-----GYHLSFSGGLELARDLISDGKSVFLDMKLF-DIGSSVTAAIEHIANM   89 (238)
Q Consensus        16 ivALD~~~~~e~l~l~~~l~~~i~~iKi-----g~~l~~~~G~~~i~~l~k~~~~If~D~K~~-DIpnTv~~~v~~~~~~   89 (238)
T Consensus         6 il~ad~~~l~~~i~~~~~~g--~d~lHiDimDG~Fvpn~t~g~~~v~~i~~~t-~~~~DvHLMv~~P---~~~i~~~~~~   79 (211)
T cd00429           6 ILSADFANLGEELKRLEEAG--ADWIHIDVMDGHFVPNLTFGPPVVKALRKHT-DLPLDVHLMVENP---ERYIEAFAKA   79 (211)
T ss_pred             HHHCCHHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCHHHHHHHHHHC-CCCEEEEEEECCH---HHHHHHHHHH
T ss_conf             53179999999999999769--9989995757972786675989999998757-9970589987188---7769999970


Q ss_pred             CCEEEEEECC-CHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC--CCCCC-HH
Q ss_conf             7508997246-04677776530235531046664147776887652012104887654454211024431--11341-03
Q gi|254780453|r   90 GVAMLTVHAY-PQTMRSAVSVVRDTGICLLAVTVLTSMDDFDLRESGYEKDISDMVRMRAVQARDIGMGG--IVCSP-QE  165 (238)
Q Consensus        90 g~d~iTvH~~-~~~l~~~~~~~~~~~~~il~Vt~LTS~~~~~l~~~g~~~~~~~~v~~~a~~a~~~g~~G--vV~s~-~e  165 (238)
T Consensus        80 g~d~I~~H~E~~~~~~~~i~~ik~~g~~~-Glal~p~T~~~~l~~~------l~~~D~vliMtV~PGf~GQ~f~~~~~~k  152 (211)
T cd00429          80 GADIITFHAEATDHLHRTIQLIKELGMKA-GVALNPGTPVEVLEPY------LDEVDLVLVMSVNPGFGGQKFIPEVLEK  152 (211)
T ss_pred             CCCEEEECCCCCCCHHHHHHHHHHCCCCC-EEEECCCCCHHHHHHH------HHHHCEEEEEEECCCCCCCCCCHHHHHH
T ss_conf             99889986432208999999999739872-3575489998999999------9751522798746887887545679999


Q ss_pred             HHHHHHHHC---CCCEE-EEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHHCCCCCHHHHHHHHH
Q ss_conf             445544202---44035-5101135786579840036989999659989999853308888899999999
Q gi|254780453|r  166 VRMVREIVG---HNMVI-VTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQ  231 (238)
Q Consensus       166 i~~ir~~~~---~~~~~-itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~a~dP~~aa~~i~  231 (238)
T Consensus       153 i~~l~~~~~~~~~~~~I~vDGGI~~~-----------~i~~l~~~Gad~~V~GS~iF~~~d~~~~i~~l~  211 (211)
T cd00429         153 IRKLRELIPENNLNLLIEVDGGINLE-----------TIPLLAEAGADVLVAGSALFGSDDYAEAIKELR  211 (211)
T ss_pred             HHHHHHHHHHCCCCEEEEEECCCCHH-----------HHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHC
T ss_conf             99999999864998599996785989-----------999999859999997937758999999999719