HHsearch alignment for GI: 254780453 and conserved domain: cd00564
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.
Probab=94.87 E-value=0.097 Score=31.67 Aligned_cols=55 Identities=31% Similarity=0.396 Sum_probs=39.7
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCCCCCEECCHHHHHHCCCCEEEECCHHCCCCCHHHHHHHHHH
Q ss_conf 4455442024403551011357865798400369899996599899998533088888999999999
Q gi|254780453|r 166 VRMVREIVGHNMVIVTPGIRMLGSATDGQKRFATPETALKYGASHIVVSRPIVRAADPVSAAQEFQR 232 (238)
Q Consensus 166 i~~ir~~~~~~~~~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~iVVGR~I~~a~dP~~aa~~i~~ 232 (238)
T Consensus 142 l~~~~~~~-~~Pv~AiGGI~~~-----------ni~~~~~~G~~giAv~s~i~~~~dp~~~~~~l~~ 196 (196)
T cd00564 142 LREIAELV-EIPVVAIGGITPE-----------NAAEVLAAGADGVAVISAITGADDPAAAARELLA 196 (196)
T ss_pred HHHHHHHC-CCCEEEECCCCHH-----------HHHHHHHCCCCEEEEHHHHHCCCCHHHHHHHHHC
T ss_conf 99999867-9998998589999-----------9999998099999972997779999999999729