HHsearch alignment for GI: 254780453 and conserved domain: cd00959
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. DERA belongs to the class I aldolases and catalyzes a reversible aldol reaction between acetaldehyde and glyceraldehyde 3-phosphate to generate 2-deoxyribose 5-phosphate. DERA is unique in catalyzing the aldol reaction between two aldehydes, and its broad substrate specificity confers considerable utility as a biocatalyst, offering an environmentally benign alternative to chiral transition metal catalysis of the asymmetric aldol reaction.
Probab=92.87 E-value=0.29 Score=28.62 Aligned_cols=158 Identities=17% Similarity=0.221 Sum_probs=73.8
Q ss_pred CHHHHHHHHHHHCCC-CCEEEECHHHHHCCCHHHHHH-HHHHCHHH--HHHHHHCCHHHHH-HHHHHHHCCCCCEEEEEE
Q ss_conf 989999999973885-228998689984255899999-98515466--7877640424678-987765215675089972
Q gi|254780453|r 23 TVKEAERIVSILSDT-VSFYKIGYHLSFSGGLELARD-LISDGKSV--FLDMKLFDIGSSV-TAAIEHIANMGVAMLTVH 97 (238)
Q Consensus 23 ~~~e~l~l~~~l~~~-i~~iKig~~l~~~~G~~~i~~-l~k~~~~I--f~D~K~~DIpnTv-~~~v~~~~~~g~d~iTvH 97 (238)
T Consensus 15 T~~~i~~l~~~A~~~~~aaVcV~p~~v-----~~a~~~L~~s~v~v~tvigFP~G~~~~~~K~~E~~~ai~~GAdEiD~V 89 (203)
T cd00959 15 TEEDIRKLCDEAKEYGFAAVCVNPCFV-----PLAREALKGSGVKVCTVIGFPLGATTTEVKVAEAREAIADGADEIDMV 89 (203)
T ss_pred CHHHHHHHHHHHHHHCCEEEEECHHHH-----HHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 999999999999875983999899999-----999998448997267771689998868789999999998299877751
Q ss_pred CC------C--H----HHHHHHHHHCCCCCCEEEEEEECC-CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC-----
Q ss_conf 46------0--4----677776530235531046664147-7768876520121048876544542110244311-----
Q gi|254780453|r 98 AY------P--Q----TMRSAVSVVRDTGICLLAVTVLTS-MDDFDLRESGYEKDISDMVRMRAVQARDIGMGGI----- 159 (238)
Q Consensus 98 ~~------~--~----~l~~~~~~~~~~~~~il~Vt~LTS-~~~~~l~~~g~~~~~~~~v~~~a~~a~~~g~~Gv----- 159 (238)
T Consensus 90 in~~~~~~g~~~~v~~ei~~v~~~~~~~~lKVIl---Et~~L~-------------~~ei~~a~~~a~~aGadfvKTSTG 153 (203)
T cd00959 90 INIGALKSGDYEAVYEEIAAVVEACGGAPLKVIL---ETGLLT-------------DEEIIKACEIAIEAGADFIKTSTG 153 (203)
T ss_pred CCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEE---ECCCCC-------------HHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 2399996070999999999998762888269997---446599-------------999999999999829788971588
Q ss_pred -C---CCCHHHHHHHHHHCCCCE-EEEECCCCCCCCCCCCCEECCHHHHHHCCCCEE
Q ss_conf -1---341034455442024403-551011357865798400369899996599899
Q gi|254780453|r 160 -V---CSPQEVRMVREIVGHNMV-IVTPGIRMLGSATDGQKRFATPETALKYGASHI 211 (238)
Q Consensus 160 -V---~s~~ei~~ir~~~~~~~~-~itPGI~~~~~~~~dq~r~~tp~~Ai~~GaD~i 211 (238)
T Consensus 154 ~~~~gat~e~v~~m~~~~~~~~giKasGGIrt~----------~~a~~~l~aGa~ri 200 (203)
T cd00959 154 FGPGGATVEDVKLMKEAVGGRVGVKAAGGIRTL----------EDALAMIEAGATRI 200 (203)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCH----------HHHHHHHHHCCHHE
T ss_conf 688998999999999983878607715897999----------99999998184122