HHsearch alignment for GI: 254780454 and conserved domain: PRK01115

>PRK01115 DNA polymerase sliding clamp; Validated.
Probab=99.27  E-value=4.6e-09  Score=73.99  Aligned_cols=225  Identities=19%  Similarity=0.299  Sum_probs=158.5

Q ss_pred             EECCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCC-----HHCCCCCH
Q ss_conf             5056113554202202300245565210116677617873489998534157666643578753310-----00001000
Q gi|254780454|r  130 FELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMP-----SIIVPRKA  204 (385)
Q Consensus       130 ~~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~-----~~iiP~k~  204 (385)
T Consensus         4 ~~i~a~~~k~i~e~---------l~~l~~e~~~~~~~~Gl--~iqamD~shv~lv~l~l~~~~F~~Y~~d~~~iGv~~~~   72 (245)
T PRK01115          4 AVISAEELKDAIDA---------LSVLVDEAKFKVTEEGI--SVRAVDPANVAMVDLELPKSAFSEYEADGGEIGVDLDR   72 (245)
T ss_pred             EEECHHHHHHHHHH---------HHHHHCEEEEEECCCEE--EEEEECCCCEEEEEEEECHHHCCEEEECCCEEEEEHHH
T ss_conf             99819999999999---------98875469999927826--99999877289999996864190798159799999899


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCC--CEEEECCEEEEEEEECCCCCCCCCCCCCC-CCCCEEEEEHHHHHHHHHHHHHCCCC
Q ss_conf             1222210277646433133455--30100250699985126655322101355-56617998489988889887410123
Q gi|254780454|r  205 VGEILRILSSKDSSVKVSLSES--RIHLNIESLSMSVRLIDGEFPNYQNVIPC-SNDKELRVNCTNLRQAVDRVSIMSSV  281 (385)
Q Consensus       205 l~el~k~l~~~~~~v~i~~~~~--~i~~~~~~~~~~srLi~g~yPdy~~vip~-~~~~~~~v~r~~l~~al~Rv~i~~~~  281 (385)
T Consensus        73 l~KIlk~~~~-~d~l~l~~~~~~~~l~i~~~~~~f~l~Lidi~~~~~~~~iP~~e~~~~i~m~S~~f~~i~~dl~~~~D~  151 (245)
T PRK01115         73 LKDILGMADS-GDTVRLELDEENRKLEISFGGLEYTLSLIDPSTIRKEPDIPELDLPAKVVLLGADLKRAVKAAEKVSDH  151 (245)
T ss_pred             HHHHHHHCCC-CCEEEEEEECCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCE
T ss_conf             8999962789-987999992899889999846289997106333234689999774599999989999999999861987


Q ss_pred             CCCCCEEEEECCEEEEEECCCCCEEEEEEEE----EEECCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCE
Q ss_conf             5553025651765999980787326899999----896288439996388998898735753346633899965898758
Q gi|254780454|r  282 RIQAVKLSLSSDKLCMTVDNPDMGKAIESMN----VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSV  357 (385)
Q Consensus       282 ~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~----~~~~G~~~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~p~  357 (385)
T Consensus       152 ----i~i~~~~~~~~~~~~g-d~~~~~~~~~~~~~~~~~~~~~~~~ysl~Yl~~~~k~~~l----s~~v~i~~~-~d~Pl  221 (245)
T PRK01115        152 ----IALGVDDEEFYMEAEG-DTDEVKLELEDDELIDLSPGEAKSLFSLDYLKDMVKAIGK----ADEVTISLG-NDFPV  221 (245)
T ss_pred             ----EEEEEECCEEEEEEEC-CCEEEEEEECCCCCEEEECCCCEEEEEHHHHHHHHHHCCC----CCEEEEEEC-CCCCE
T ss_conf             ----9999948999999984-7736999966986168403662358879999998735157----986999975-99889


Q ss_pred             EEECCCCCCCCCCCCCCCEEEEEEE
Q ss_conf             9943776544455566763799832
Q gi|254780454|r  358 FIRGKDKDSKNNKDNKVNAFYVLMP  382 (385)
Q Consensus       358 ~i~~~~~~~~~~~~~~~~~~~liMP  382 (385)
T Consensus       222 ~l~y~~~------~~~g~l~f~LAP  240 (245)
T PRK01115        222 KIEFYIA------DGNGRVTYLLAP  240 (245)
T ss_pred             EEEEEEC------CCCEEEEEEECC
T ss_conf             9999977------983999999888