HHsearch alignment for GI: 254780454 and conserved domain: pfam02767
>pfam02767 DNA_pol3_beta_2 DNA polymerase III beta subunit, central domain. A dimer of the beta subunit of DNA polymerase beta forms a ring which encircles duplex DNA. Each monomer contains three domains of identical topology and DNA clamp fold.
Probab=98.84 E-value=8.2e-08 Score=66.41 Aligned_cols=113 Identities=18% Similarity=0.191 Sum_probs=89.5
Q ss_pred EEEHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEEEEEEEEEEE--ECCCCEEEEEHHHHHHHHHCC
Q ss_conf 985999999999875020378886101338999989979999967828999999777--526807999499877887407
Q gi|254780454|r 4 TVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS--VDVCGSITVSAHLLYDIVRKL 81 (385)
Q Consensus 4 ~i~~~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~~i~~~i~~~--i~~~G~~~v~a~~l~~iik~L 81 (385)
T Consensus 1 Ti~~~~l~~~i~~t~fA~s~d~~r~~L~Gv~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~~~iIP~k~l~el~k~l 80 (116)
T pfam02767 1 TLPQKVLKELIEQTAFAMGRDETRYVLNGVNLETEGNELRLVATDGHRLAVRKLELSVENPDIFSVIVPRKTLLELAKLL 80 (116)
T ss_pred CCCHHHHHHHHHHEEEEECCCCCHHHHEEEEEEEECCEEEEEEECCHHEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHH
T ss_conf 97989999998437599804646266128999998999999997603001014521247887603897789999999862
Q ss_pred CCCC-CEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCC
Q ss_conf 7777-30477733675089998678202430366211432
Q gi|254780454|r 82 QDGA-QISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120 (385)
Q Consensus 82 ~~~~-~i~~~~~~~~~~~i~i~~~~~~~~l~~~~~~~fP~ 120 (385)
T Consensus 81 ~~~~~~v~i~~~---~~~i~f~~~~~~~~srLieG-~yPd 116 (116)
T pfam02767 81 TDNGELVKLQIG---EGQIRFEFGNVIFTSRLIDG-KFPD 116 (116)
T ss_pred CCCCCEEEEEEC---CCEEEEEECCEEEEEEEEEE-ECCC
T ss_conf 689973999986---99999998999999999710-6779