HHsearch results for GI: 254780454 and protein with PDBid: 3a1j_A

Probab=98.44  E-value=1.6e-05  Score=51.24  Aligned_cols=209  Identities=17%  Similarity=0.163  Sum_probs=125.8

Q ss_pred             CEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCC----------HHCCCCCHHHHHHHHCCCCC---CCCCCC
Q ss_conf             10116677617873489998534157666643578753310----------00001000122221027764---643313
Q gi|254780454|r  156 YLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMP----------SIIVPRKAVGEILRILSSKD---SSVKVS  222 (385)
Q Consensus       156 ~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~----------~~iiP~k~l~el~k~l~~~~---~~v~i~  222 (385)
                      +...++|++..++  |.+.|.|..|.|...+.++...-+..          .+-++.|.+..+.|-+...+   ..+.+.
T Consensus        23 i~~ev~~~~~~~g--l~l~a~d~s~~al~~~~l~~~~F~~Y~~~~~~~~~~~~~v~~k~l~~ilk~~~~~~~~~~~~~l~  100 (266)
T 3a1j_A           23 IGDELYLEPLEDG--LSLRTVNSSRSAYACFLFAPLFFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCIS  100 (266)
T ss_dssp             TCSEEEEEEETTE--EEEEEECTTSCEEEEEEECGGGSSEEECCCSSSCCCCEEEEHHHHHHHHCCHHHHHHHEEEEEEE
T ss_pred             HCCEEEEEEECCE--EEEEEECCCCEEEEEEEECHHHCCEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEEE
T ss_conf             4182999994785--89999998887999999876747278756888755798764899999862012467642399999


Q ss_pred             CCC--CCEEEEC--CE---EEEEEEECCCCCCCCCCCCCC-CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEC-C
Q ss_conf             345--5301002--50---699985126655322101355-5661799848998888988741012355530256517-6
Q gi|254780454|r  223 LSE--SRIHLNI--ES---LSMSVRLIDGEFPNYQNVIPC-SNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSS-D  293 (385)
Q Consensus       223 ~~~--~~i~~~~--~~---~~~~srLi~g~yPdy~~vip~-~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~-~  293 (385)
                      .++  +.+.+.+  .+   ..+.-+|++..-.  +-.+|+ +++..+.++-..|.+.++.+..++++    |.+..++ +
T Consensus       101 ~~~~~~~l~i~~~~~~~~~k~~~l~l~d~~~~--~~~~p~~~~~~~i~~~s~~f~~~~~~~~~~~d~----i~i~~~~~~  174 (266)
T 3a1j_A          101 LNGRSSRLVVQLHCKFGVRKTHNLSFQDCESL--QAVFDPASCPHMLRAPARVLGEAVLPFSPALAE----VTLGIGRGR  174 (266)
T ss_dssp             CCTTCSEEEEEEEEGGGCEEEEEEECEECCCC--CCCCCGGGCSEEEEEEHHHHHHHHTTSCTTCCE----EEEEECGGG
T ss_pred             ECCCCCEEEEEEECCCCCEEEEEEEECCCCCC--CCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCE----EEEEECCCC
T ss_conf             64898559999905788179999653046644--577880008679997689999999975503877----999987998


Q ss_pred             EEEEEECCCCCE-----EEEEEEEE------EE-CCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEC
Q ss_conf             599998078732-----68999998------96-2884399963889988987357533466338999658987589943
Q gi|254780454|r  294 KLCMTVDNPDMG-----KAIESMNV------YY-NECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRG  361 (385)
Q Consensus       294 ~l~i~~~~~e~g-----~~~e~i~~------~~-~G~~~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~  361 (385)
                      .+.+++.....+     ..+.++..      .| .+++..+.|+-+||..+++..++-   ...|.+++..+.+|+++.-
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~fslkyl~~~~~~a~~~---~~~v~i~~~~~g~Pl~~~~  251 (266)
T 3a1j_A          175 RVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLLSFAESA---NLNLSIHFDAPGRPAIFTI  251 (266)
T ss_dssp             CEEEEEECCC-CCCSCCCCEEEEEECGGGCSEEECCTTCEEEEEHHHHHHHHHHHHHT---TCEEEEEECSTTSCEEEEE
T ss_pred             EEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHC---CCEEEEEECCCCCCEEEEE
T ss_conf             4999985146665554114565405843127995389739999999999999998735---9859999889998789999


Q ss_pred             CCCCCCCCCCCCCCEEEEEEEE
Q ss_conf             7765444555667637998321
Q gi|254780454|r  362 KDKDSKNNKDNKVNAFYVLMPM  383 (385)
Q Consensus       362 ~~~~~~~~~~~~~~~~~liMPv  383 (385)
                      ..+..        ...|++++|
T Consensus       252 ~~~~~--------~~~f~lAtl  265 (266)
T 3a1j_A          252 KDSLL--------DGHFVLATL  265 (266)
T ss_dssp             ECSSE--------EEEEEECCC
T ss_pred             ECCCE--------EEEEEEEEC
T ss_conf             65977--------999999977