HHsearch results for GI: 254780454 and protein with PDBid: 3d1g_A

>3d1g_A DNA polymerase III subunit beta; chemical probe, DNA sliding clamp, DNA replication, rational drug design, antibiotic target, transferase; HET: DNA 322; 1.64A {Escherichia coli} SCOP: d.131.1.1 d.131.1.1 d.131.1.1 PDB: 1mmi_A* 1unn_A* 2pol_A* 3bep_A* 3d1e_A* 3d1f_A* 1ok7_A* 1jql_A* 1jqj_A* 3f1v_A*
Probab=99.57  E-value=4e-12  Score=91.25  Aligned_cols=201  Identities=15%  Similarity=0.213  Sum_probs=93.2

Q ss_pred             EECCCHHHHHHHCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEEEEEEECCCCCCCCCHHCCCCCHHHHHH
Q ss_conf             50561135542022023002455652101166776178734899985341576666435787533100000100012222
Q gi|254780454|r  130 FELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEIL  209 (385)
Q Consensus       130 ~~i~~~~l~~~i~~t~~a~s~d~~r~~L~Gv~~~~~~~~~~l~~vaTDg~RLa~~~~~~~~~~~~~~~~iiP~k~l~el~  209 (385)
                      |.++.+.|.++|..+..++++..+.|+|.||+++..++  ++++.|||+-.=...+++.. ...++..++||+|.+.++.
T Consensus         3 ~~i~k~~L~~~l~~v~~~i~~k~~~piL~~ili~a~~~--~l~l~atd~e~~i~~~i~~~-~v~~~G~~~v~ak~l~~iv   79 (366)
T 3d1g_A            3 FTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADG--TLSLTGTDLEMEMVARVALV-QPHEPGATTVPARKFFDIC   79 (366)
T ss_dssp             EEEEHHHHHHHHHHHSTTCSSCCCSGGGGEEEEEEETT--EEEEEEECSSEEEEEEEECC-SCCBCEEEEEEHHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECC--EEEEEEECCCEEEEEEEECC-EECCCCEEEEECHHHHHHH
T ss_conf             99989999999999975618898738874789999899--99999988873999999041-5235746999235677787


Q ss_pred             HHCCCCCCCCCCCCCCCCEEEECCEEEEEEEECC-CCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCC-CCC----
Q ss_conf             1027764643313345530100250699985126-6553221013555661799848998888988741012-355----
Q gi|254780454|r  210 RILSSKDSSVKVSLSESRIHLNIESLSMSVRLID-GEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSS-VRI----  283 (385)
Q Consensus       210 k~l~~~~~~v~i~~~~~~i~~~~~~~~~~srLi~-g~yPdy~~vip~~~~~~~~v~r~~l~~al~Rv~i~~~-~~~----  283 (385)
                      |-++++ ..+.+...++++.++.++..|.-+.++ ..||.....   +....+.++..+|.++++++...++ +..    
T Consensus        80 r~l~~~-~~i~~~~~~~~l~I~~~~~~f~l~~~~~~~fP~~~~~---~~~~~~~i~~~~l~~~i~~v~~a~s~d~~r~~L  155 (366)
T 3d1g_A           80 RGLPEG-AEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDW---QSEVEFTLPQATMKRLIEATQFSMAHQDVRYYL  155 (366)
T ss_dssp             HHSCTT-CEEEEEEETTEEEEEETTEEEEEECBCGGGSCCCCCC---CCSEEEEECHHHHHHHHHHHGGGSCSSCSSGGG
T ss_pred             HCCCCC-CEEEEEECCCEEEEEECCEEEEEECCCHHHCCCCCCC---CCCCEEEECHHHHHHHHHHEEEECCCCCCCEEE
T ss_conf             447999-7499996188899998988999606881108761113---666148876999998665477312565674325


Q ss_pred             CCCEEEEECCEEEEEECCCCCEEEEEEEEEEECCCCEEEEECHHHHHHHHHHCCC
Q ss_conf             5302565176599998078732689999989628843999638899889873575
Q gi|254780454|r  284 QAVKLSLSSDKLCMTVDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISS  338 (385)
Q Consensus       284 ~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~~~~G~~~~i~fN~~yl~d~L~~~~~  338 (385)
                      ++|.|.++++.+++.+.+. +-=+.-.+++....++..+...++.+.+..+.+..
T Consensus       156 ~Gv~~~~~~~~l~~vaTDg-~RLa~~~~~~~~~~~~~~~iip~k~l~~~~~~~~~  209 (366)
T 3d1g_A          156 NGMLFETEGEELRTVATDG-HRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDG  209 (366)
T ss_dssp             SEEEEEEEEEEEEEEEECS-SEEEEEEEEEEEEEEEEEEEEEHHHHHHHHHTCCS
T ss_pred             EEEEEEECCCEEEEEECCC-CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             5599996499999999068-43899983046777632310152369998766404