HHsearch results for GI: 254780454 and protein with PDBid: 3g65_A
>3g65_A Cell cycle checkpoint control protein RAD9A; PCNA, DNA binding clamp, DNA damage, DNA repair, exonuclease, hydrolase, nuclease, nucleus, phosphoprotein; 2.90A {Homo sapiens}
Probab=98.47 E-value=2.9e-05 Score=49.63 Aligned_cols=130 Identities=18% Similarity=0.206 Sum_probs=71.4
Q ss_pred EEEEECCCCCCCCCCCCCC-CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEC-CEEEEEECCCC----CEE-EEE
Q ss_conf 9985126655322101355-5661799848998888988741012355530256517-65999980787----326-899
Q gi|254780454|r 237 MSVRLIDGEFPNYQNVIPC-SNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSS-DKLCMTVDNPD----MGK-AIE 309 (385)
Q Consensus 237 ~~srLi~g~yPdy~~vip~-~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~-~~l~i~~~~~e----~g~-~~e 309 (385)
+.-++++... -+..+|+ ++++.+.++-+.|.+.++-+....++ |.+..++ +.+.+++.... .++ ..-
T Consensus 122 ~~l~l~d~e~--~~~~~~~~~~~~~i~i~s~~~~~~l~~~~~~~ee----iti~~~~~~~~~~~s~~~~~~~~~~~~~~t 195 (296)
T 3g65_A 122 HNLSFQDCES--LQAVFDPASCPHMLRAPARVLGEAVLPFSPALAE----VTLGIGRGRRVILRSYHEEEADSTAKAMVT 195 (296)
T ss_dssp EEECCCCCCC--CCCCCCGGGCSCEEEEEHHHHHHHSTTSCTTCCE----EEEEEETTTEEEEEECCC-----CCCCCEE
T ss_pred EEEEEECCCC--CCCCCCHHHCCEEEEECHHHHHHHHHHCCCCCCE----EEEEECCCCEEEEEECCCCCCCCCCCEEEE
T ss_conf 9966543563--3466784468689997579999999854145567----999977998599995356766655412588
Q ss_pred EEEE------EE-CCCCEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 9998------96-2884399963889988987357533466338999658987589943776544455566763799832
Q gi|254780454|r 310 SMNV------YY-NECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMP 382 (385)
Q Consensus 310 ~i~~------~~-~G~~~~i~fN~~yl~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMP 382 (385)
++.+ .| -+++..+.|+-+||..+++..++- ...|.++|..|.+|+++..+... ....+++||
T Consensus 196 ~v~i~~~e~~~~~v~e~~~itfslk~~k~il~~a~~~---~~~v~i~f~~pg~Pi~~~~~~~~--------~~~~fvlaT 264 (296)
T 3g65_A 196 EMCLGEEDFQQLQAQEGVAITFCLKEFRGLLSFAESA---NLNLSIHFDAPGRPAIFTIKDSL--------LDGHFVLAT 264 (296)
T ss_dssp EEEECGGGCSEEECCTTCEEEEEHHHHHHHHHHHHHT---TCEEEEECCSTTSCEEEEEECSS--------CEEEEEECC
T ss_pred EEEECCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHC---CCCEEEEECCCCCCEEEEEECCC--------EEEEEEEEC
T ss_conf 8753566403798389928999999999999998756---98289998789977899995795--------899999944
Q ss_pred E
Q ss_conf 1
Q gi|254780454|r 383 M 383 (385)
Q Consensus 383 v 383 (385)
+
T Consensus 265 ~ 265 (296)
T 3g65_A 265 L 265 (296)
T ss_dssp C
T ss_pred C
T ss_conf 6