HHsearch results for GI: 254780454 and protein with PDBid: 3g65_A
>3g65_A Cell cycle checkpoint control protein RAD9A; PCNA, DNA binding clamp, DNA damage, DNA repair, exonuclease, hydrolase, nuclease, nucleus, phosphoprotein; 2.90A {Homo sapiens}
Probab=97.47 E-value=0.0048 Score=36.13 Aligned_cols=134 Identities=10% Similarity=0.001 Sum_probs=88.1
Q ss_pred CEEEEEH---HHHHHHHHHHHHHHCCCCCCCHHCEEEEEEECCEEEEEEECCEE--EEEEEEEE------EECCCC----
Q ss_conf 9589859---99999999875020378886101338999989979999967828--99999977------752680----
Q gi|254780454|r 1 MKITVER---SDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEI--EITGAIPA------SVDVCG---- 65 (385)
Q Consensus 1 Mk~~i~~---~~L~~~l~~v~~~i~~k~~~pil~~ilie~~~~~l~l~atd~~~--~i~~~i~~------~i~~~G---- 65 (385)
||++++. +.|.++++-++++. ..++|++..++|.+.|-|..- .+...++. +++.+.
T Consensus 1 M~~~i~~~~~k~f~r~i~~Lski~---------~ev~i~~~~~gl~l~amn~s~sa~~~~~~~~~fF~~Y~~~~~~~~~~ 71 (296)
T 3g65_A 1 MKCLVTGGNVKVLGKAVHSLSRIG---------DELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQYQAATPGQDLL 71 (296)
T ss_dssp CEEEEETHHHHHHHHHHHHHHTTC---------SEEEEEEETTEEEEEEECTTSCEEEEEEETTSSCCCCCC-------C
T ss_pred CEEEECHHHHHHHHHHHHHHHHHC---------CCEEEEEECCEEEEEEECCCCEEEEEEEECHHHCHHEECCCCCCCEE
T ss_conf 989990177899999999999647---------81999992781899998877769999997658441035779987239
Q ss_pred EEEEEHHHHHHHHHCCCCC----CCEEEEEECCCCEEE--EEEECC---CEEEEECCCCCC-CCCCCCCCCCEEEECCCH
Q ss_conf 7999499877887407777----730477733675089--998678---202430366211-432123324304505611
Q gi|254780454|r 66 SITVSAHLLYDIVRKLQDG----AQISFFKENELGTEV--NISHGD---SNFYLQSFPESE-FPSTKEEEYVYSFELASS 135 (385)
Q Consensus 66 ~~~v~a~~l~~iik~L~~~----~~i~~~~~~~~~~~i--~i~~~~---~~~~l~~~~~~~-fP~~~~~~~~~~~~i~~~ 135 (385)
.+.++.|.+..++|.+... ..+.+..+.+. ..+ .+.+.. -.|.|+.+|.+. -+.+|..+....+.+++.
T Consensus 72 ~~~i~~K~l~~i~k~~~~~~~~~e~l~i~~~~~~-~~l~i~~~~~~gi~k~~~l~l~d~e~~~~~~~~~~~~~~i~i~s~ 150 (296)
T 3g65_A 72 RCKILMKSFLSVFRSLAMLEKTVEKCCISLNGRS-SRLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPAR 150 (296)
T ss_dssp CEEEEHHHHHTTTSSTTC----CCEEEEEECCC----EEEEEECGGGCEEEEEECCCCCCCCCCCCCGGGCSCEEEEEHH
T ss_pred EEEEEHHHHHHHHCCCCCCCCCEEEEEEEECCCC-CEEEEEEEECCCCEEEEEEEEECCCCCCCCCCHHHCCEEEEECHH
T ss_conf 9999826888886551124652128999984898-669999993698289999665435633466784468689997579
Q ss_pred HHHHHHCCE
Q ss_conf 355420220
Q gi|254780454|r 136 VLKNLVERT 144 (385)
Q Consensus 136 ~l~~~i~~t 144 (385)
.|+++++..
T Consensus 151 ~~~~~l~~~ 159 (296)
T 3g65_A 151 VLGEAVLPF 159 (296)
T ss_dssp HHHHHSTTS
T ss_pred HHHHHHHHC
T ss_conf 999999854