Probab=97.95 E-value=0.00026 Score=42.44 Aligned_cols=110 Identities=15% Similarity=0.250 Sum_probs=85.4 Q ss_pred CCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEEEEEEE------EE-CCCCEEEEECHHH Q ss_conf 5661799848998888988741012355530256517659999807873268999998------96-2884399963889 Q gi|254780454|r 256 SNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDMGKAIESMNV------YY-NECPMDICFNYKY 328 (385) Q Consensus 256 ~~~~~~~v~r~~l~~al~Rv~i~~~~~~~~i~l~~~~~~l~i~~~~~e~g~~~e~i~~------~~-~G~~~~i~fN~~y 328 (385) +++..+.++-.+|.++++.+..+++. |.++.+++.+.+++.+ |.|++...+.. .+ .+++++..|..+| T Consensus 4 ~~~~~i~~~s~~f~~ii~~l~~~~d~----i~i~~~~~~i~f~~~g-d~g~~~v~~~~~~~~~~~~~~~~~~~~~ysl~y 78 (121) T d1iz5a2 4 PFTAKVVVLGEVLKAAVKAASLVSDS----IKFIARENEFIMKAEG-ETQEVEIKLTLEDEGLLDIEVQEETKSAYGVSY 78 (121) T ss_dssp CCCEEEEEEHHHHHHHHHHHTTTCSE----EEEEEETTEEEEEEEC-SSCEEEEEEETTTTSSSEEEESSCEEEEEEHHH T ss_pred CCEEEEEEEHHHHHHHHHHHHHCCCE----EEEEECCCEEEEEEEC-CCCEEEEEECCCCCCCEEEECCCCEEEEEEHHH T ss_conf 84089999999999999998731896----9999829999999984-476799999479874279972885689998899 Q ss_pred HHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEEEE Q ss_conf 988987357533466338999658987589943776544455566763799832 Q gi|254780454|r 329 LLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDSKNNKDNKVNAFYVLMP 382 (385) Q Consensus 329 l~d~L~~~~~~~~~~e~i~l~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~liMP 382 (385) |..+.++..- .+.|++++. ...|+.+.-.-.+ .....|.|-| T Consensus 79 L~~~~K~~~l----s~~V~i~~~-~~~Pl~l~y~~~~-------~g~i~f~LAP 120 (121) T d1iz5a2 79 LSDMVKGLGK----ADEVTIKFG-NEMPMQMEYYIRD-------EGRLTFLLAP 120 (121) T ss_dssp HHHHHTTSCT----TCEEEEEEC-TTCCEEEEEEETT-------TEEEEEEECC T ss_pred HHHHHHHCCC----CCEEEEEEC-CCCCEEEEEEECC-------CCEEEEEECC T ss_conf 8987612258----998999986-9988999999689-------9489999826
class: Alpha and beta proteins (a+b)
fold: DNA clamp
superfamily: DNA clamp
family: DNA polymerase processivity factor
domain: Proliferating cell nuclear antigen (PCNA)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]