BLAST/PSIBLAST alignment of GI: 254780454 and GI: 116250102 at iteration 1
>gi|116250102|ref|YP_765940.1| DNA polymerase III subunit beta [Rhizobium leguminosarum bv. viciae 3841] Length = 372
>gi|115254750|emb|CAK05824.1| putative DNA polymerase III, beta chain [Rhizobium leguminosarum bv. viciae 3841] Length = 372
Score = 362 bits (929), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/387 (48%), Positives = 260/387 (67%), Gaps = 17/387 (4%)
Query: 1 MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
M+IT+ERS++L+ L H R++ER+NTIP+ +VLL+A+ L++KA+ ++EIT A PAS
Sbjct: 1 MRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGQKLDMKATDLDLEITEATPAS 60
Query: 61 VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFPS 120
V+ G+ TV AHLLYDIVRKL DG+++ ++ G + + G S F LQ PES+FP
Sbjct: 61 VEQPGATTVPAHLLYDIVRKLSDGSEVLLATSSD-GGSMTVQSGRSKFSLQCLPESDFPD 119
Query: 121 TKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEED--LKLCAVATDG 178
+ +SF+L ++ LK L++RT FA++TEE RYYLNGIFFH E + LKL AVATDG
Sbjct: 120 LTAGTFTHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGQLKLRAVATDG 179
Query: 179 HRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMS 238
HRLA A+VD + MP II+PRK VGE+ +++ + + V V +S+++I L I S+ M+
Sbjct: 180 HRLARADVDAPSGSEGMPGIIIPRKTVGELQKLVDNPEVMVTVEVSDAKIRLTIGSIVMT 239
Query: 239 VRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMT 298
+LIDG FP+YQ VIP NDKE+RV+CT+ QAVDRVS +SS R +AVKL+LS +L +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTSFAQAVDRVSTISSERGRAVKLALSEGQLMLT 299
Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
V+NPD G A E + V Y+ M+I FN KYLL+I +S +E +F L + S
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSG-----EEAIFLLADAGSPTL 354
Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMRI 385
IR D +A YVLMPMR+
Sbjct: 355 IRDTAGD---------DALYVLMPMRV 372