PSIBLAST alignment of GI: 254780454 and protein with PDB id: 2pol

gi|494833|pdb|2POL|A Chain A, Three-Dimensional Structure Of The Beta Subunit Of Escherichia Coli Dna Polymerase Iii Holoenzyme: A Sliding Dna Clamp Length = 366
>gi|494834|pdb|2POL|B Chain B, Three-Dimensional Structure Of The Beta Subunit Of Escherichia Coli Dna Polymerase Iii Holoenzyme: A Sliding Dna Clamp Length = 366

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 211/386 (54%), Gaps = 21/386 (5%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
           MK TVER  +L+ L      +  + T+P+  ++LLQ  DG L +  +  E+E+   +   
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV 60

Query: 60  SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
                G+ TV A   +DI R L +GA+I+   E E    + +  G S F L + P ++FP
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGE---RMLVRSGRSRFSLSTLPAADFP 117

Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
           +  + +    F L  + +K L+E T F+MA +++RYYLNG+ F    E  +L  VATDGH
Sbjct: 118 NLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGE--ELRTVATDGH 175

Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
           RLAV  + I  Q     S+IVPRK V E++R+L   D+ ++V +  + I  ++     + 
Sbjct: 176 RLAVCSMPI-GQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTS 234

Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTV 299
           +L+DG FP+Y+ V+P + DK L   C  L+QA  R +I+S+ + + V+L +S ++L +T 
Sbjct: 235 KLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITA 294

Query: 300 DNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFI 359
           +NP+  +A E ++V Y+   M+I FN  Y+L++++ +       + V   L  S SSV I
Sbjct: 295 NNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKC-----ENVRMMLTDSVSSVQI 349

Query: 360 RGKDKDSKNNKDNKVNAFYVLMPMRI 385
                 S           YV+MPMR+
Sbjct: 350 EDAASQSAA---------YVVMPMRL 366