RPSBLAST alignment for GI: 254780454 and conserved domain: TIGR00663
>gnl|CDD|161984 TIGR00663, dnan, DNA polymerase III, beta subunit. University). Length = 367
Score = 240 bits (614), Expect = 6e-64
Identities = 120/386 (31%), Positives = 199/386 (51%), Gaps = 22/386 (5%)
Query: 1 MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIP-A 59
MK +ER D+L+ L R++ + TIP+ ++LL+ D L I A+ +I + I
Sbjct: 1 MKFIIERDDLLKELSKVQRVLSNRPTIPILSNILLEVKDDKLTITATDLDISLESQIFTI 60
Query: 60 SVDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
+ + GS+T++A DIVR L D S ++ I+ S F L + EFP
Sbjct: 61 NSEQEGSVTINAKKFLDIVRALPD----SKITLEVKNDKLAITSEKSRFKLPTLSAEEFP 116
Query: 120 STKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGH 179
+ E S E+ S VLK + +T FA +E R LNG+ I ++ L VATDGH
Sbjct: 117 NLPTIEEGVSIEIPSDVLKEAINQTAFAAGEDETRPVLNGV--LIEQKGKTLLLVATDGH 174
Query: 180 RLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIESLSMSV 239
RLAV ++ + S+I+P KA+ E+L++LS S V SL++ +++ + + +
Sbjct: 175 RLAVCKLKSEVSDEEDFSVIIPAKALNELLKLLSENGSVVLKSLNDQLVYIELGNYKFTS 234
Query: 240 RLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSS-VRIQAVKLSLSSDKLCMT 298
+LI+G +P+Y++VIP VN L++A+ RVS+++ R + LS + KL +
Sbjct: 235 KLIEGNYPDYKSVIPKEQKNSFTVNREELKEAIKRVSLLADEKRNLVLTLSENGKKLKES 294
Query: 299 VDNPDMGKAIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVF 358
D ++G+A E + V Y+ + I FN KYLL+ + + S E+ + + + +
Sbjct: 295 SDTQEIGEAEEEIEVAYDGEDLVIAFNIKYLLDALKALKS-----KEIQIQFNDPSKPLL 349
Query: 359 IRGKDKDSKNNKDNKVNAFYVLMPMR 384
I D K+ Y++MPMR
Sbjct: 350 IE-------PENDEKI--TYLIMPMR 366