RPSBLAST alignment of GI: 254780454 and MMDB domain: 1ud9_A_

>1ud9_A (A:) DNA polymerase sliding clamp A; DNA-binding, DNA replication, DNA binding protein; HET: DNA; 1.68A {Sulfolobus tokodaii}Length = 245

 Score =  131 bits (330), Expect = 1e-31
 Identities = 28/257 (10%), Positives = 84/257 (32%), Gaps = 31/257 (12%)

Query: 140 LVERTHFAMATEEIRYYLNGIFFHINEEDLKLCAVATDGHRLAVAEVDIVA------QIA 193
             +        + +   ++   F I  E ++L  VA D   +++ ++++         + 
Sbjct: 5   YDDVRDLKAIIQALLKLVDEALFDIKPEGIQL--VAIDKAHISLIKIELPKEMFKEYDVP 62

Query: 194 KMPSIIVPRKAVGEILRILSSK-DSSVKVSLSESRIHLNIESLSMSVRLIDGEFPNYQNV 252
           +        + + ++L+    K +  +     E        +L+    + + E    +  
Sbjct: 63  EEFKFGFNTQYMSKLLKAAKRKEEIIIDADSPEVVKLTLSGALNRVFNVNNIEVLPPEVP 122

Query: 253 IPCSN-DKELRVNCTNLRQAVDRVSIMSSVRIQAVKLSLSSDKLCMTVDNPDM-----GK 306
                 D +  +N + L+ A+  ++ ++      + +S + +K+ +  +  +       K
Sbjct: 123 EVNLEFDIKATINASGLKNAIGEIAEVAD----TLLISGNEEKVVVKGEGENKVEVEFSK 178

Query: 307 AIESMNVYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLDSSNSSVFIRGKDKDS 366
              S+            ++ +YL +II           + V    +    + +    +  
Sbjct: 179 DTGSLADIEFNKESSSAYDVEYLNDIISLTKL-----SDYVKVAFADQKPMQLEFNMEGG 233

Query: 367 KNNKDNKVNAFYVLMPM 383
                      Y+L P 
Sbjct: 234 G-------KVTYLLAPK 243