RPSBLAST alignment of GI: 254780454 and MMDB domain: 1vpk_A_1-143_208-255
>1vpk_A (A:1-143,A:208-255) DNA polymerase III, beta subunit; TM0262, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima MSB8}Length = 191
Score = 108 bits (272), Expect = 1e-24
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Query: 1 MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
MK+TV ++ + + A + + +K+ P+ L + DG I A+ E + + A+
Sbjct: 13 MKVTVTTLELKDKITIASKALAKKSVKPILAGFLFEVKDGNFYICATDLETGVKATVNAA 72
Query: 61 -VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSFPESEFP 119
+ V ++ +V+ L D E + + IS G + F + + P EFP
Sbjct: 73 EISGEARFVVPGDVIQKMVKVLPDE-ITELSLEGD---ALVISSGSTVFRITTMPADEFP 128
Query: 120 STKEEEYVYSFELASSVLKNL 140
E +FE+ + +K +
Sbjct: 129 EITPAESGITFEVDTKSMKEV 149