RPSBLAST alignment of GI: 254780454 and protein with PDBid: 2avt

>2avt_A DNA polymerase III beta subunit; beta clamp, sliding clamp, replication, transferase; HET: DNA; 2.00A {Streptococcus pyogenes} PDB: 2awa_A* Length = 378

 Score =  175 bits (443), Expect = 2e-44
 Identities = 80/394 (20%), Positives = 166/394 (42%), Gaps = 27/394 (6%)

Query: 1   MKITVERSDILELLGHACRIIERKNTIPVSCHVLLQANDGLLEIKASGPEIEITGAIPAS 60
           ++ ++ R+  +  L    R I  KN IP+   + ++     + +  S  +I I   IP S
Sbjct: 2   IQFSINRTLFIHALNTTKRAISTKNAIPILSSIKIEVTSTGVTLTGSNGQISIENTIPVS 61

Query: 61  -------VDVCGSITVSAHLLYDIVRKLQDGAQISFFKENELGTEVNISHGDSNFYLQSF 113
                  +   G+I + A    +I+  L D +      E        ++ G S   L+  
Sbjct: 62  NENAGLLITSPGAILLEASFFINIISSLPDISINVKEIEQHQVV---LTSGKSEITLKGK 118

Query: 114 PESEFPSTKEEEYVYSFELASSVLKNLVERTHFAMATEEIRYYLNGIFFHINEEDLKLCA 173
              ++P  +E        L + +LK+++  T FA + +E R  L G+   ++    K   
Sbjct: 119 DVDQYPRLQEVSTENPLILKTKLLKSIIAETAFAASLQESRPILTGVHIVLSNH--KDFK 176

Query: 174 VATDGHRLAVAEVDIVAQIAKMPSIIVPRKAVGEILRILSSKDSSVKVSLSESRIHLNIE 233
                       +  +   +    +++P K++ E   + +    +V+V  S S+I    E
Sbjct: 177 AVATDSHRMSQRLITLDNTSADFMVVLPSKSLREFSAVFTDDIETVEVFFSPSQILFRSE 236

Query: 234 SLSMSVRLIDGEFPNYQNVIPCSNDKELRVNCTNLRQAVDRVSIMSSV-RIQAVKLSLSS 292
            +S   RL++G +P+   ++    + E+  N  +LR A++R  ++S+  +   VKL ++ 
Sbjct: 237 HISFYTRLLEGNYPDTDRLLMTEFETEVVFNTQSLRHAMERAFLISNATQNGTVKLEITQ 296

Query: 293 DKLCMTVDNPDMGKAIESMN-VYYNECPMDICFNYKYLLEIIDNISSDEVVDDEVVFRLD 351
           + +   V++P++GK  E ++ V  +   + I FN  YL+E +  I S     + V     
Sbjct: 297 NHISAHVNSPEVGKVNEDLDIVSQSGSDLTISFNPTYLIESLKAIKS-----ETVKIHFL 351

Query: 352 SSNSSVFIRGKDKDSKNNKDNKVNAFYVLMPMRI 385
           S      +   D++         +   ++ P+R 
Sbjct: 352 SPVRPFTLTPGDEEE--------SFIQLITPVRT 377